PLAZA 3.0 Dicots gene overview : AL3G05150

Gene: AL3G05150 (Arabidopsis lyrata)

Overview

Gene Identifier: AL3G05150
Transcript Identifier: AL3G05150.1
Gene Type: Coding gene
Location: scaffold_3 : 1956909-1960099 : positive

Family

Gene family: HOM03D001426
(111 genes in 30 species)
specific family
Subfamily: ORTHO03D000489
(83 genes in 30 species)
specific family
Duplication type: Block duplicate

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Descriptions

Description (AnnoMine): Mitochondrial Rho GTPase

Only text-mined description found ...
Description of best ortholog(s):

Identifiers

Identifier	Name
pid	477819
GeneName	g477819
id	PAC:16064959

Toolbox

Explore

...the colinearity of this gene with other genomes.
...the local gene organization for homologous genes.
...the phylogenetic tree of the homologous gene family.
...the orthologs using the Integrative Orthology Viewer.
...the conserved binding sites (upstream/downstream,intron)

View

Biological Process

GO term	Evidence(s)	Provider	Description	Source
GO:0007264	IEA	Genome Project	small GTPase mediated signal transduction
GO:0009860	ISO	PLAZA Tree-based Orthology	pollen tube growth	AT5G27540
GO:0009790	ISO	PLAZA Tree-based Orthology	embryo development	AT5G27540
GO:0007005	ISO	PLAZA Tree-based Orthology	mitochondrion organization	AT5G27540
GO:0009737	ISO	PLAZA Tree-based Orthology	response to abscisic acid	AT3G63150
GO:0015031	IEA	PLAZA Homology	protein transport	HOM03D001426

Molecular Function

GO term	Evidence(s)	Provider	Description	Source
GO:0005525	IEA	Genome Project	GTP binding
GO:0005509	IEA	InterPro	calcium ion binding
GO:0003924	ISO	PLAZA Tree-based Orthology	GTPase activity	AT3G63150

Cellular Component

GO term	Evidence(s)	Provider	Description	Source
GO:0005622	IEA	Genome Project	intracellular
GO:0005739	ISO	PLAZA Tree-based Orthology	mitochondrion	AT3G63150 AT5G27540

Color Legend

Experimental Evidence

Electronic Evidence

Computational Reviewed Evidence

InterPro	Description
IPR013567	EF hand associated, type-2
IPR011992	EF-hand domain pair
IPR013684	Mitochondrial Rho-like
IPR027417	P-loop containing nucleoside triphosphate hydrolase
IPR020860	MIRO
IPR013566	EF hand associated, type-1

Mapman id	Description
30.5	signalling.G-proteins

No SignalP domains detected for this gene.