Anchorpoints

Gene id
AT4G40060
Organism
Arabidopsis thaliana

Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
AT2G22430homeobox protein 6 (HB6); FUNCTIONS IN: protein binding, sequence-specific DNA binding, DNA binding, transcription activator activity, sequence-specific DNA binding transcription factor activity; INVOLVED IN: response to water deprivation, positive regulation of transcription, abscisic acid mediated signaling pathway, negative regulation of abscisic acid mediated signaling pathway, regulation of transcription, DNA-dependent; LOCATED IN: nucleus; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Homeobox, conserved site (InterPro:IPR017970), Homeobox (InterPro:IPR001356), Homeodomain-like (InterPro:IPR009057), Helix-turn-helix motif, lambda-like repressor (InterPro:IPR000047), Leucine zipper, homeobox-associated (InterPro:IPR003106), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: homeobox protein 16 (TAIR:AT4G40060.1); Has 10935 Blast hits to 10899 proteins in 558 species: Archae - 5; Bacteria - 20; Metazoa - 8544; Fungi - 195; Plants - 1932; Viruses - 5; Other Eukaryotes - 234 (source: NCBI BLink). homeobox protein 6 Encodes a homeodomain leucine zipper class I (HD-Zip I) protein that is a target of the protein phosphatase ABI1 and regulates hormone responses in Arabidopsis.2-View


Orthologs (inter-species colinear regions)

Arabidopsis lyrata

Gene id Description Chromosome Strand Multiplicon
AL7G02330No description available.scaffold_7+View
AL8G32130No description available.scaffold_8-View
AL4G01890No description available.scaffold_4-View

Brassica rapa

Gene id Description Chromosome Strand Multiplicon
BR01G00940No description available.A01-View
BR04G12540No description available.A04-View
BR09G09670No description available.A09+View
BR06G23230No description available.A06-View

Beta vulgaris

Gene id Description Chromosome Strand Multiplicon
BV6G05200No description available.Bvchr6.sca005-View

Citrullus lanatus

Gene id Description Chromosome Strand Multiplicon
CL01G18850No description available.Chr1+View

Cucumis melo

Gene id Description Chromosome Strand Multiplicon
CM00007G07650No description available.CM3.5_scaffold00007+View

Carica papaya

Gene id Description Chromosome Strand Multiplicon
CP00036G01760No description available.supercontig_36-View

Capsella rubella

Gene id Description Chromosome Strand Multiplicon
CRU_004G01510No description available.scaffold_4-View
CRU_008G25410No description available.scaffold_8-View
CRU_007G01930No description available.scaffold_7-View

Eucalyptus grandis

Gene id Description Chromosome Strand Multiplicon
EG0008G38420No description available.scaffold_8-View
EG0006G03270No description available.scaffold_6-View

Fragaria vesca

Gene id Description Chromosome Strand Multiplicon
FV0G22050Homeobox-leucine zipper protein ATHB-6 (probable)scf0513168+View

Glycine max

Gene id Description Chromosome Strand Multiplicon
GM18G01830No description available.Gm18+View
GM08G14130No description available.Gm08+View
GM11G37920No description available.Gm11+View
GM05G30940No description available.Gm05+View

Gossypium raimondii

Gene id Description Chromosome Strand Multiplicon
GR09G23390No description available.Chr09+View
GR03G04150No description available.Chr03-View

Malus domestica

Gene id Description Chromosome Strand Multiplicon
MD15G025180No description available.15+View

Medicago truncatula

Gene id Description Chromosome Strand Multiplicon
MT8G089895homeobox associated leucine zipper proteinchr8+View
MT3G086790homeobox associated leucine zipper proteinchr3+View

Populus trichocarpa

Gene id Description Chromosome Strand Multiplicon
PT02G10060No description available.Chr02-View
PT05G16150No description available.Chr05+View

Ricinus communis

Gene id Description Chromosome Strand Multiplicon
RC29908G02300No description available.29908-View

Solanum lycopersicum

Gene id Description Chromosome Strand Multiplicon
SL05G051460Homeobox-leucine zipper protein (AHRD V1 ***- Q9FXN8_ZINEL)%3B contains Interpro domain(s) IPR003106 Leucine zipper%2C homeobox-associatedch05+View
SL04G074700Homeobox-leucine zipper protein (AHRD V1 *-*- Q9FXN8_ZINEL)%3B contains Interpro domain(s) IPR003106 Leucine zipper%2C homeobox-associatedch04-View
SL11G010270Homeobox-leucine zipper protein (AHRD V1 *-*- Q9FXN8_ZINEL)%3B contains Interpro domain(s) IPR001356 Homeoboxch11-View

Solanum tuberosum

Gene id Description Chromosome Strand Multiplicon
ST11G009430Homeobox-leucine zipper protein (AHRD V1 *-*- Q9FXN8_ZINEL); contains Interpro domain(s) IPR001356 Homeoboxchr11+View
ST04G028470Homeobox-leucine zipper protein (AHRD V1 *-*- Q9FXN8_ZINEL); contains Interpro domain(s) IPR003106 Leucine zipper, homeobox-associatedchr04-View
ST05G023910Homeobox-leucine zipper protein (AHRD V1 ***- Q9FXN8_ZINEL); contains Interpro domain(s) IPR003106 Leucine zipper, homeobox-associatedchr05+View

Theobroma cacao

Gene id Description Chromosome Strand Multiplicon
TC0001G09170No description available.scaffold_1+View

Thellungiella parvula

Gene id Description Chromosome Strand Multiplicon
TP4G01450similar to AT2G22430|ATHB6ch4-1-View
TP7G35790similar to AT4G40060|ATHB16 (ARABIDOPSIS THALIANA HOMEOBOX PROTEIN 16)ch7-6+View

Vitis vinifera

Gene id Description Chromosome Strand Multiplicon
VV00G03060name=GSVIVG01002447001;chrUn-View
VV18G03960name=GSVIVG01009083001;chr18-View


Download

Gene id
Species
Description
Chromosome
Strand