Expansion plot
Gene family finder
Ks-graphs
Skyline plot
Synteny plot
WGDotplot
Functional clusters
WGMapping
BLAST
WorkbenchAnchorpoints
- Gene id
- AT4G18350
- Organism
- Arabidopsis thaliana
Paralogs (intra-species colinear regions)
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| AT1G30100 | nine-cis-epoxycarotenoid dioxygenase 5 (NCED5); CONTAINS InterPro DOMAIN/s: Carotenoid oxygenase (InterPro:IPR004294); BEST Arabidopsis thaliana protein match is: nine-cis-epoxycarotenoid dioxygenase 2 (TAIR:AT4G18350.1); Has 2882 Blast hits to 2845 proteins in 494 species: Archae - 16; Bacteria - 802; Metazoa - 232; Fungi - 202; Plants - 893; Viruses - 0; Other Eukaryotes - 737 (source: NCBI BLink). nine-cis-epoxycarotenoid dioxygenase 5 Encodes 9-cis-epoxycarotenoid dioxygenase, a key enzyme in the biosynthesis of abscisic acid. The expression of this gene increases during the first 6h of imbibition. | 1 | + | View |
Orthologs (inter-species colinear regions)
Arabidopsis lyrata
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| AL1G31100 | No description available. | scaffold_1 | + | View |
| AL7G24440 | No description available. | scaffold_7 | - | View |
Brassica rapa
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| BR03G44500 | No description available. | A03 | + | View |
| BR01G09430 | No description available. | A01 | + | View |
| BR09G28550 | No description available. | A09 | - | View |
Citrullus lanatus
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| CL03G06540 | No description available. | Chr3 | - | View |
Capsella rubella
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| CRU_007G21890 | No description available. | scaffold_7 | - | View |
| CRU_001G27120 | No description available. | scaffold_1 | + | View |
Eucalyptus grandis
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| EG0004G02160 | No description available. | scaffold_4 | + | View |
Fragaria vesca
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| FV3G05380 | 9-cis-epoxycarotenoid dioxygenase NCED1, chloroplastic, Precursor (similar to) | LG3 | + | View |
Gossypium raimondii
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| GR11G04520 | No description available. | Chr11 | + | View |
| GR09G15460 | No description available. | Chr09 | - | View |
Malus domestica
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| MD05G007000 | No description available. | 5 | + | View |
| MD05G007590 | No description available. | 5 | + | View |
Manihot esculenta
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| ME03859G00170 | No description available. | scaffold03859 | - | View |
Prunus persica
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| PPE_004G07790 | No description available. | scaffold_4 | + | View |
Ricinus communis
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| RC29693G00290 | No description available. | 29693 | - | View |
Theobroma cacao
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| TC0006G14670 | No description available. | scaffold_6 | - | View |
Thellungiella parvula
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| TP1G25960 | similar to AT1G30100|NCED5 (NINE-CIS-EPOXYCAROTENOID DIOXYGENASE 5) | ch1-1 | + | View |
| TP7G15730 | similar to AT4G18350|NCED2 (NINE-CIS-EPOXYCAROTENOID DIOXYGENASE 2) | ch7-4 | - | View |
Vitis vinifera
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| VV10G04440 | name=GSVIVG01021507001; | chr10 | + | View |