Gene: AT1G30100 (Arabidopsis thaliana)

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Gene Identifier
AT1G30100
Transcript Identifier
AT1G30100.1
Gene Type
Coding gene
Location
1 : 10571383-10573152 : positive

Family

Gene family
HOM03D000313
(372 genes in 31 species)
specific family
Subfamily
ORTHO03D000541
(79 genes in 27 species)
specific family
Duplication type
Block duplicate

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Descriptions

Description
nine-cis-epoxycarotenoid dioxygenase 5
Curated Summary
Encodes 9-cis-epoxycarotenoid dioxygenase, a key enzyme in the biosynthesis of abscisic acid. The expression of this gene increases during the first 6h of imbibition.
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Identifiers

Identifier Name
aliasnine-cis-epoxycarotenoid dioxygenase 5
aliasATNCED5
aliasNCED5
aliasNINE-CIS-EPOXYCAROTENOID DIOXYGENASE 5
uniprotQ9C6Z1

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0009688IMP, TAS, UniProtabscisic acid biosynthetic process1 2 3 4 5 6 7
GO:0009414IGIUniProtresponse to water deprivation1 2 3 4 5 6
GO:0010162IGIUniProtseed dormancy process1 2 3 4 5 6
GO:0042538ISOPLAZA Tree-based Orthologyhyperosmotic salinity responseAT3G14440

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0045549TASUniProt9-cis-epoxycarotenoid dioxygenase activity1 2 3 4 5 6
GO:0046872IEAUniProtmetal ion binding1 2 3 4 5
GO:0016702IEAPLAZA Homologyoxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygenHOM03D000313

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0009507ISMGene Ontologychloroplast1
GO:0009579IDAUniProtthylakoid1 2 3 4 5 6
GO:0009535IEAUniProtchloroplast thylakoid membrane1 2 3 4 5
GO:0009570ISOPLAZA Tree-based Orthologychloroplast stromaAT4G18350 AT3G14440 AT1G78390
GO:0009536IEAPLAZA HomologyplastidHOM03D000313

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Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR004294Carotenoid oxygenase

Mapman id Description
17.1.1.1.10hormone metabolism.abscisic acid.synthesis-degradation.synthesis.9-cis-epoxycarotenoid dioxygenase
No SignalP domains detected for this gene.