Anchorpoints

Gene id
AT4G15560
Organism
Arabidopsis thaliana

Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
AT3G21500Encodes a protein postulated to have 1-deoxy-D-xylulose 5-phosphate synthase activity. 1-deoxy-D-xylulose 5-phosphate synthase 1 1-deoxy-D-xylulose 5-phosphate synthase 1 (DXPS1); FUNCTIONS IN: 1-deoxy-D-xylulose-5-phosphate synthase activity; INVOLVED IN: metabolic process, terpenoid biosynthetic process; EXPRESSED IN: stem, embryo, sepal, stamen; EXPRESSED DURING: 4 anthesis, C globular stage; CONTAINS InterPro DOMAIN/s: Transketolase, N-terminal (InterPro:IPR005474), Transketolase, C-terminal (InterPro:IPR005476), Transketolase-like, C-terminal (InterPro:IPR015941), Deoxyxylulose-5-phosphate synthase (InterPro:IPR005477), Transketolase, C-terminal/Pyruvate-ferredoxin oxidoreductase, domain II (InterPro:IPR009014), Dehydrogenase, E1 component (InterPro:IPR001017), Transketolase-like, pyrimidine-binding domain (InterPro:IPR005475), Transketolase binding site (InterPro:IPR020826); BEST Arabidopsis thaliana protein match is: Deoxyxylulose-5-phosphate synthase (TAIR:AT4G15560.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).3-View


Orthologs (inter-species colinear regions)

Arabidopsis lyrata

Gene id Description Chromosome Strand Multiplicon
AL7G28180No description available.scaffold_7-View
AL3G23620No description available.scaffold_3-View

Brassica rapa

Gene id Description Chromosome Strand Multiplicon
BR03G42740No description available.A03+View
BR03G36770No description available.A03-View
BR01G20320No description available.A01-View

Capsella rubella

Gene id Description Chromosome Strand Multiplicon
CRU_003G20570No description available.scaffold_3-View
CRU_007G25130No description available.scaffold_7-View

Citrus sinensis

Gene id Description Chromosome Strand Multiplicon
CS00011G02320No description available.scaffold00011+View

Glycine max

Gene id Description Chromosome Strand Multiplicon
GM17G02480No description available.Gm17+View
GM07G38260No description available.Gm07-View

Malus domestica

Gene id Description Chromosome Strand Multiplicon
MD16G013010No description available.16-View

Medicago truncatula

Gene id Description Chromosome Strand Multiplicon
MT4G1186401-deoxy-D-xylulose-5-phosphate synthasechr4+View

Theobroma cacao

Gene id Description Chromosome Strand Multiplicon
TC0004G27670No description available.scaffold_4+View

Thellungiella parvula

Gene id Description Chromosome Strand Multiplicon
TP7G13820similar to AT4G15560|CLA1 (CLOROPLASTOS ALTERADOS 1)ch7-4+View
TP3G19540similar to AT4G15560|CLA1 (CLOROPLASTOS ALTERADOS 1)ch3-1-View

Vitis vinifera

Gene id Description Chromosome Strand Multiplicon
VV05G03690name=GSVIVG01017832001;chr5-View


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Gene id
Species
Description
Chromosome
Strand