Anchorpoints

Gene id
AT3G01650
Organism
Arabidopsis thaliana

Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
AT5G14420RING domain ligase2 (RGLG2); FUNCTIONS IN: ubiquitin-protein ligase activity; INVOLVED IN: N-terminal protein myristoylation, cytokinin metabolic process, auxin metabolic process; LOCATED IN: plasma membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Copine (InterPro:IPR010734), von Willebrand factor, type A (InterPro:IPR002035); BEST Arabidopsis thaliana protein match is: RING domain ligase1 (TAIR:AT3G01650.1); Has 2368 Blast hits to 2301 proteins in 208 species: Archae - 0; Bacteria - 31; Metazoa - 1318; Fungi - 57; Plants - 528; Viruses - 55; Other Eukaryotes - 379 (source: NCBI BLink). Encodes RGLG2 (RING domain ligase 2), a RING domain ubiquitin E3 ligase that negatively regulates the drought stress response by mediating ERF53 transcriptional activity. RING domain ligase25-View


Orthologs (inter-species colinear regions)

Arabidopsis lyrata

Gene id Description Chromosome Strand Multiplicon
AL6G14200No description available.scaffold_6-View
AL3G00460No description available.scaffold_3-View

Brassica rapa

Gene id Description Chromosome Strand Multiplicon
BR05G36320No description available.A05+View
BR03G05920No description available.A03-View
BR03G28440No description available.A03-View
BR02G06920No description available.A02-View
BR10G20240No description available.A10+View

Citrullus lanatus

Gene id Description Chromosome Strand Multiplicon
CL09G19860No description available.Chr9-View
CL10G11880No description available.Chr10-View

Carica papaya

Gene id Description Chromosome Strand Multiplicon
CP00130G00700No description available.supercontig_130-View

Capsella rubella

Gene id Description Chromosome Strand Multiplicon
CRU_003G00390No description available.scaffold_3-View
CRU_006G12310No description available.scaffold_6-View

Eucalyptus grandis

Gene id Description Chromosome Strand Multiplicon
EG0010G19640No description available.scaffold_10+View
EG0009G14420No description available.scaffold_9-View

Glycine max

Gene id Description Chromosome Strand Multiplicon
GM04G36400No description available.Gm04+View
GM06G18500No description available.Gm06-View

Gossypium raimondii

Gene id Description Chromosome Strand Multiplicon
GR12G06570No description available.Chr12+View
GR01G26680No description available.Chr01+View

Malus domestica

Gene id Description Chromosome Strand Multiplicon
MD17G001390No description available.17-View

Manihot esculenta

Gene id Description Chromosome Strand Multiplicon
ME05335G00110No description available.scaffold05335-View
ME04137G00400No description available.scaffold04137+View

Prunus persica

Gene id Description Chromosome Strand Multiplicon
PPE_003G27200No description available.scaffold_3+View

Populus trichocarpa

Gene id Description Chromosome Strand Multiplicon
PT01G34220No description available.Chr01-View

Thellungiella parvula

Gene id Description Chromosome Strand Multiplicon
TP3G00400similar to AT3G01650|RGLG1 (RING domain Ligase1)ch3-1-View
TP6G29600similar to AT5G14420|RGLG2 (RING domain Ligase2)ch6-6+View

Vitis vinifera

Gene id Description Chromosome Strand Multiplicon
VV14G10820name=GSVIVG01032380001;chr14+View


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Gene id
Species
Description
Chromosome
Strand