Gene: AL6G14200 (Arabidopsis lyrata)

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Gene Identifier
AL6G14200
Transcript Identifier
AL6G14200.1
Gene Type
Coding gene
Location
scaffold_6 : 5820703-5822907 : negative

Family

Gene family
HOM03D000591
(229 genes in 30 species)
specific family
Subfamily
ORTHO03D000240
(118 genes in 30 species)
specific family
Duplication type
Block duplicate

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Descriptions

Description (AnnoMine)
Copine family protein 2
Only text-mined description found ...
Description of best ortholog(s):

Identifiers

Identifier Name
pid488284
GeneNameg488284
idPAC:16054053

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0009690ISOPLAZA Integrative Orthologycytokinin metabolic processAT5G14420
GO:0009850ISOPLAZA Integrative Orthologyauxin metabolic processAT5G14420
GO:0080148ISOPLAZA Integrative Orthologynegative regulation of response to water deprivationAT5G14420

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0005515IEAInterProprotein binding
GO:0008270IEAInterProzinc ion binding
GO:0004842ISOPLAZA Integrative Orthologyubiquitin-protein ligase activityAT5G14420

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005886ISOPLAZA Integrative Orthologyplasma membraneAT5G14420
GO:0005634ISOPLAZA Integrative OrthologynucleusAT5G14420

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR002035von Willebrand factor, type A
IPR010734Copine
IPR001841Zinc finger, RING-type
IPR013083Zinc finger, RING/FYVE/PHD-type

Mapman id Description
29.5.11.4.2protein.degradation.ubiquitin.E3.RING
No SignalP domains detected for this gene.