Anchorpoints

Gene id
AT2G42280
Organism
Arabidopsis thaliana

Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
AT3G57800basic helix-loop-helix (bHLH) DNA-binding superfamily protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT2G42300.1); Has 1234 Blast hits to 1224 proteins in 46 species: Archae - 0; Bacteria - 2; Metazoa - 7; Fungi - 4; Plants - 1221; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). basic helix-loop-helix (bHLH) DNA-binding superfamily protein3-View


Orthologs (inter-species colinear regions)

Arabidopsis lyrata

Gene id Description Chromosome Strand Multiplicon
AL5G28320No description available.scaffold_5-View
AL4G29470No description available.scaffold_4-View

Brassica rapa

Gene id Description Chromosome Strand Multiplicon
BR07G15410No description available.A07-View
BR05G02690No description available.A05+View
BR04G02580No description available.A04+View
BR04G25270No description available.A04-View

Beta vulgaris

Gene id Description Chromosome Strand Multiplicon
BV3G15850No description available.Bvchr3.sca009-View

Cucumis melo

Gene id Description Chromosome Strand Multiplicon
CM00011G05870No description available.CM3.5_scaffold00011-View

Carica papaya

Gene id Description Chromosome Strand Multiplicon
CP00085G01160No description available.supercontig_85-View

Capsella rubella

Gene id Description Chromosome Strand Multiplicon
CRU_004G23760No description available.scaffold_4-View
CRU_005G23290No description available.scaffold_5-View

Eucalyptus grandis

Gene id Description Chromosome Strand Multiplicon
EG0001G20290No description available.scaffold_1-View

Glycine max

Gene id Description Chromosome Strand Multiplicon
GM19G32570No description available.Gm19-View
GM02G29518No description available.Gm02-View
GM03G31510No description available.Gm03+View

Gossypium raimondii

Gene id Description Chromosome Strand Multiplicon
GR06G13990No description available.Chr06-View
GR07G36170No description available.Chr07-View

Lotus japonicus

Gene id Description Chromosome Strand Multiplicon
LJ1G059560No description available.chr1-View

Medicago truncatula

Gene id Description Chromosome Strand Multiplicon
MT7G092510transcription factorchr7-View

Oryza sativa ssp. japonica

Gene id Description Chromosome Strand Multiplicon
OS09G31300helix-loop-helix DNA-binding domain containing protein, expressed9+View

Populus trichocarpa

Gene id Description Chromosome Strand Multiplicon
PT16G05050No description available.Chr16-View
PT06G05720No description available.Chr06-View

Theobroma cacao

Gene id Description Chromosome Strand Multiplicon
TC0005G16690No description available.scaffold_5-View

Thellungiella parvula

Gene id Description Chromosome Strand Multiplicon
TP4G24450similar to AT2G42280|basic helix-loop-helix (bHLH) family proteinch4-6-View
TP5G04890similar to AT3G57800|basic helix-loop-helix (bHLH) family proteinch5-1+View

Zea mays

Gene id Description Chromosome Strand Multiplicon
ZM01G28690No description available.1+View


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Gene id
Species
Description
Chromosome
Strand