Gene: AT2G42280 (Arabidopsis thaliana)

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Gene Identifier
AT2G42280
Transcript Identifier
AT2G42280.1
Gene Type
Coding gene
Location
2 : 17611428-17613163 : negative

Family

Gene family
HOM03D000046
(1586 genes in 29 species)
specific family
Subfamily
ORTHO03D010330
(26 genes in 22 species)
specific family
Duplication type
Tandem duplicate   and   Block duplicate

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Descriptions

Description
basic helix-loop-helix (bHLH) DNA-binding superfamily protein
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Identifiers

Identifier Name
aliasFLOWERING BHLH 4
aliasFBH4
uniprotQ66GR3

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0006355TASGene Ontologyregulation of transcription, DNA-dependent1
GO:0048573IMPUniProtphotoperiodism, flowering1 2 3 4 5
GO:0046685RCAGene Ontologyresponse to arsenic-containing substance1
GO:0006351IEAUniProttranscription, DNA-templated1 2 3 4

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0003677IEA, ISSUniProtDNA binding1 2 3 4 5
GO:0003700ISSUniProtsequence-specific DNA binding transcription factor activity1 2 3 4 5
GO:0046983IEAInterProprotein dimerization activity
GO:0005515IEAPLAZA Homologyprotein bindingHOM03D000046
GO:0005488IEAPLAZA HomologybindingHOM03D000046

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005634IEA, ISMUniProtnucleus1 2 3 4 5

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Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR011598Myc-type, basic helix-loop-helix (bHLH) domain

Mapman id Description
27.3.6RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family
No SignalP domains detected for this gene.

Binding sites bound by this Transcription Factor

Binding siteNameDescriptionCounts
Matrix_511AT1G05805;AT1G35460;AT1G51140;AT2G42280;AT2G43140;AT4G09180Not available1229 genes in 10 species

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DatabaseType
PlnTFDBbHLH
PlantTFDBbHLH