Expansion plot
Gene family finder
Ks-graphs
Skyline plot
Synteny plot
WGDotplot
Functional clusters
WGMapping
BLAST
WorkbenchAnchorpoints
- Gene id
- AT1G16470
- Organism
- Arabidopsis thaliana
Paralogs (intra-species colinear regions)
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| AT1G79210 | N-terminal nucleophile aminohydrolases (Ntn hydrolases) superfamily protein N-terminal nucleophile aminohydrolases (Ntn hydrolases) superfamily protein; FUNCTIONS IN: endopeptidase activity, threonine-type endopeptidase activity; INVOLVED IN: defense response to bacterium, ubiquitin-dependent protein catabolic process; LOCATED IN: proteasome core complex, proteasome complex; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Proteasome, alpha-subunit, conserved site (InterPro:IPR000426), Proteasome, subunit alpha/beta (InterPro:IPR001353); BEST Arabidopsis thaliana protein match is: proteasome subunit PAB1 (TAIR:AT1G16470.2); Has 6770 Blast hits to 6769 proteins in 496 species: Archae - 887; Bacteria - 41; Metazoa - 2415; Fungi - 1555; Plants - 857; Viruses - 0; Other Eukaryotes - 1015 (source: NCBI BLink). | 1 | - | View |
Orthologs (inter-species colinear regions)
Arabidopsis lyrata
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| AL2G28230 | No description available. | scaffold_2 | - | View |
| AL1G17340 | No description available. | scaffold_1 | + | View |
Brassica rapa
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| BR02G25210 | No description available. | A02 | - | View |
| BR07G33810 | No description available. | A07 | - | View |
| BR07G18590 | No description available. | A07 | + | View |
Capsella rubella
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| CRU_002G24660 | No description available. | scaffold_2 | - | View |
| CRU_001G15490 | No description available. | scaffold_1 | + | View |
Citrus sinensis
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| CS00052G00700 | No description available. | scaffold00052 | + | View |
Glycine max
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| GM15G41330 | No description available. | Gm15 | - | View |
| GM08G17810 | No description available. | Gm08 | + | View |
Lotus japonicus
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| LJ3G014300 | No description available. | chr3 | + | View |
Malus domestica
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| MD10G016910 | No description available. | 10 | + | View |
Manihot esculenta
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| ME02477G00200 | No description available. | scaffold02477 | - | View |
| ME03115G00170 | No description available. | scaffold03115 | - | View |
Prunus persica
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| PPE_004G12930 | No description available. | scaffold_4 | - | View |
Populus trichocarpa
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| PT16G13960 | No description available. | Chr16 | + | View |
Ricinus communis
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| RC30169G00900 | No description available. | 30169 | + | View |
Thellungiella parvula
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| TP1G14620 | similar to AT1G16470|PAB1 (PROTEASOME SUBUNIT PAB1) | ch1-1 | + | View |
| TP5G34260 | similar to AT1G79210|20S proteasome alpha subunit B, putative | ch5-7 | - | View |