Gene: AT1G16470 (Arabidopsis thaliana)

Overview top

Gene Identifier
AT1G16470
Transcript Identifier
AT1G16470.1
Gene Type
Coding gene
Location
1 : 5623122-5625439 : positive

Family

Gene family
HOM03D000253
(431 genes in 31 species)
specific family
Subfamily
ORTHO03D001991
(44 genes in 30 species)
specific family
Duplication type
Block duplicate

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Descriptions

Description
proteasome subunit PAB1
Curated Summary
Encodes 20S proteasome subunit PAB1 (PAB1).
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Identifiers

Identifier Name
aliasproteasome subunit PAB1
aliasPAB1
uniprotQ8L4A7
uniprotO23708

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0006511IEA, TAS, UniProtubiquitin-dependent protein catabolic process1 2 3 4 5 6 7 8 9 10 11 12 13 14 15
GO:0010043IEPUniProtresponse to zinc ion1 2 3 4 5 6 7 8 9
GO:0051603IEAInterProproteolysis involved in cellular protein catabolic process
GO:0042742IEPUniProtdefense response to bacterium1 2 3 4 5 6
GO:0044265IEAPLAZA Homologycellular macromolecule catabolic processHOM03D000253
GO:1901575IEAPLAZA Homologyorganic substance catabolic processHOM03D000253
GO:0030163IEAPLAZA Homologyprotein catabolic processHOM03D000253
GO:0019941IEAPLAZA Homologymodification-dependent protein catabolic processHOM03D000253
GO:0006508IEAPLAZA HomologyproteolysisHOM03D000253
GO:0044257IEAPLAZA Homologycellular protein catabolic processHOM03D000253
GO:0009056IEAPLAZA Homologycatabolic processHOM03D000253
GO:0009057IEAPLAZA Homologymacromolecule catabolic processHOM03D000253
GO:0043632IEAPLAZA Homologymodification-dependent macromolecule catabolic processHOM03D000253
GO:0044248IEAPLAZA Homologycellular catabolic processHOM03D000253
GO:0044267IEAPLAZA Homologycellular protein metabolic processHOM03D000253
GO:0019538IEAPLAZA Homologyprotein metabolic processHOM03D000253

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0008233ISSGene Ontologypeptidase activity1
GO:0004175IEAInterProendopeptidase activity
GO:0004298IEAUniProtthreonine-type endopeptidase activity1 2 3 4 5 6 7 8 9 10 11 12 13 14
GO:0070003IEAPLAZA Homologythreonine-type peptidase activityHOM03D000253
GO:0070011IEAPLAZA Homologypeptidase activity, acting on L-amino acid peptidesHOM03D000253
GO:0016787IEAPLAZA Homologyhydrolase activityHOM03D000253

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0009507ISMGene Ontologychloroplast1
GO:0022626IDAUniProtcytosolic ribosome1 2 3 4 5 6 7 8 9
GO:0000502IDAUniProtproteasome complex1 2 3 4 5 6 7 8 9 10 11 12 13 14 15
GO:0005829IDAUniProtcytosol1 2 3 4 5 6 7
GO:0005839TAS, IEAGene Ontologyproteasome core complex1
GO:0019773IEAUniProtproteasome core complex, alpha-subunit complex1 2 3 4 5 6 7 8 9 10 11 12 13 14
GO:0005634IEAUniProtnucleus1 2 3 4 5 6 7 8 9 10 11 12 13 14
GO:0005622IEAPLAZA HomologyintracellularHOM03D000253
GO:0032991IEAPLAZA Homologymacromolecular complexHOM03D000253
GO:0005623IEAPLAZA HomologycellHOM03D000253
GO:0043234IEAPLAZA Homologyprotein complexHOM03D000253
GO:0044464IEAPLAZA Homologycell partHOM03D000253
GO:0044424IEAPLAZA Homologyintracellular partHOM03D000253

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR000426Proteasome alpha-subunit, N-terminal domain
IPR001353Proteasome, subunit alpha/beta
IPR023332Proteasome A-type subunit

Mapman id Description
29.5protein.degradation
No SignalP domains detected for this gene.