Anchorpoints

Gene id
AT1G01620
Organism
Arabidopsis thaliana

Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
AT4G00430plasma membrane intrinsic protein 1;4 (PIP1;4); FUNCTIONS IN: water channel activity; INVOLVED IN: response to water deprivation, transport; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Major intrinsic protein, conserved site (InterPro:IPR022357), Aquaporin (InterPro:IPR012269), Major intrinsic protein (InterPro:IPR000425); BEST Arabidopsis thaliana protein match is: plasma membrane intrinsic protein 1B (TAIR:AT2G45960.1); Has 10702 Blast hits to 10683 proteins in 2216 species: Archae - 88; Bacteria - 5147; Metazoa - 1472; Fungi - 442; Plants - 2512; Viruses - 2; Other Eukaryotes - 1039 (source: NCBI BLink). plasma membrane intrinsic protein 1;4 a member of the plasma membrane intrinsic protein subfamily PIP1.4-View
AT2G45960a member of the plasma membrane intrinsic protein subfamily PIP1. localizes to the plasma membrane and exhibits water transport activity in Xenopus oocyte. expressed ubiquitously and protein level decreases slightly during leaf development. plasma membrane intrinsic protein 1B (PIP1B); FUNCTIONS IN: water channel activity; INVOLVED IN: response to water deprivation, response to salt stress, transport, water transport; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Major intrinsic protein, conserved site (InterPro:IPR022357), Aquaporin (InterPro:IPR012269), Major intrinsic protein (InterPro:IPR000425); BEST Arabidopsis thaliana protein match is: plasma membrane intrinsic protein 1;4 (TAIR:AT4G00430.1); Has 10384 Blast hits to 10346 proteins in 2170 species: Archae - 101; Bacteria - 5000; Metazoa - 1330; Fungi - 442; Plants - 2465; Viruses - 0; Other Eukaryotes - 1046 (source: NCBI BLink). plasma membrane intrinsic protein 1B2+View
AT4G01470Encodes AtTIP1;3, functions as water and urea channels in pollen. tonoplast intrinsic protein 1;3 (TIP1;3); FUNCTIONS IN: water channel activity, urea transmembrane transporter activity; INVOLVED IN: transport, urea transport, water transport; LOCATED IN: integral to membrane, membrane; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Major intrinsic protein, conserved site (InterPro:IPR022357), Aquaporin (InterPro:IPR012269), Major intrinsic protein (InterPro:IPR000425); BEST Arabidopsis thaliana protein match is: gamma tonoplast intrinsic protein (TAIR:AT2G36830.1); Has 10761 Blast hits to 10728 proteins in 2135 species: Archae - 83; Bacteria - 5069; Metazoa - 1488; Fungi - 435; Plants - 2488; Viruses - 0; Other Eukaryotes - 1198 (source: NCBI BLink). tonoplast intrinsic protein 1;34-View
AT3G61430plasma membrane intrinsic protein 1A a member of the plasma membrane intrinsic protein subfamily PIP1. localizes to the plasma membrane and exhibits water transport activity in Xenopus oocyte. expressed ubiquitously and protein level decreases slightly during leaf development. plasma membrane intrinsic protein 1A (PIP1A); FUNCTIONS IN: water channel activity; INVOLVED IN: response to water deprivation, response to salt stress, transport, water transport; LOCATED IN: mitochondrion, plasma membrane, vacuole, membrane, chloroplast envelope; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Major intrinsic protein, conserved site (InterPro:IPR022357), Aquaporin (InterPro:IPR012269), Major intrinsic protein (InterPro:IPR000425); BEST Arabidopsis thaliana protein match is: plasma membrane intrinsic protein 1B (TAIR:AT2G45960.1); Has 10784 Blast hits to 10748 proteins in 2216 species: Archae - 97; Bacteria - 5154; Metazoa - 1474; Fungi - 450; Plants - 2515; Viruses - 2; Other Eukaryotes - 1092 (source: NCBI BLink).3+View


Orthologs (inter-species colinear regions)

Arabidopsis lyrata

Gene id Description Chromosome Strand Multiplicon
AL5G32130No description available.scaffold_5+View
AL6G40100No description available.scaffold_6+View
AL1G00660No description available.scaffold_1+View
AL6G41210No description available.scaffold_6+View

Brassica rapa

Gene id Description Chromosome Strand Multiplicon
BR04G27410No description available.A04+View
BR04G00930No description available.A04-View
BR03G28210No description available.A03+View
BR05G05400No description available.A05+View
BR10G06290No description available.A10-View
BR09G54850No description available.A09-View

Beta vulgaris

Gene id Description Chromosome Strand Multiplicon
BV1G06490No description available.Bvchr1.sca001-View

Carica papaya

Gene id Description Chromosome Strand Multiplicon
CP00011G00150No description available.supercontig_11+View

Capsella rubella

Gene id Description Chromosome Strand Multiplicon
CRU_005G26690No description available.scaffold_5+View
CRU_004G27630No description available.scaffold_4+View
CRU_006G35590No description available.scaffold_6+View
CRU_001G00550No description available.scaffold_1+View

Eucalyptus grandis

Gene id Description Chromosome Strand Multiplicon
EG0005G05460No description available.scaffold_5+View

Fragaria vesca

Gene id Description Chromosome Strand Multiplicon
FV7G07910Aquaporin PIP1-3 (AtPIP1) (putative)LG7-View

Glycine max

Gene id Description Chromosome Strand Multiplicon
GM01G42950No description available.Gm01+View
GM11G02530No description available.Gm11-View
GM05G37730No description available.Gm05-View
GM08G01860No description available.Gm08+View

Gossypium raimondii

Gene id Description Chromosome Strand Multiplicon
GR01G16900No description available.Chr01-View
GR07G10000No description available.Chr07+View
GR03G15810No description available.Chr03-View

Lotus japonicus

Gene id Description Chromosome Strand Multiplicon
LJ4G046000No description available.chr4+View

Malus domestica

Gene id Description Chromosome Strand Multiplicon
MD15G029390No description available.15-View

Medicago truncatula

Gene id Description Chromosome Strand Multiplicon
MT8G098375major intrinsic protein (MIP) family transporterchr8+View

Oryza sativa ssp. japonica

Gene id Description Chromosome Strand Multiplicon
OS02G44630aquaporin protein, putative, expressed Aquaporin PIP1-12+View
OS04G47220aquaporin protein, putative, expressed Probable aquaporin PIP1-24+View

Prunus persica

Gene id Description Chromosome Strand Multiplicon
PPE_002G16660No description available.scaffold_2+View

Ricinus communis

Gene id Description Chromosome Strand Multiplicon
RC30174G02950No description available.30174+View
RC30190G03970No description available.30190+View

Solanum lycopersicum

Gene id Description Chromosome Strand Multiplicon
SL01G094690Aquaporin (AHRD V1 ***- Q40266_MESCR)%3B contains Interpro domain(s) IPR012269 Aquaporinch01+View

Solanum tuberosum

Gene id Description Chromosome Strand Multiplicon
ST01G032080Aquaporin (AHRD V1 ***- Q40266_MESCR); contains Interpro domain(s) IPR012269 Aquaporinchr01+View

Theobroma cacao

Gene id Description Chromosome Strand Multiplicon
TC0001G35520No description available.scaffold_1-View
TC0003G27620No description available.scaffold_3+View

Thellungiella parvula

Gene id Description Chromosome Strand Multiplicon
TP4G28030similar to AT2G45960|PIP1B (NAMED PLASMA MEMBRANE INTRINSIC PROTEIN 1B)ch4-6+View
TP5G01970similar to AT3G61430|PIP1A (PLASMA MEMBRANE INTRINSIC PROTEIN 1A)ch5-1-View
TP1G00700similar to AT1G01620|PIP1C (PLASMA MEMBRANE INTRINSIC PROTEIN 1C)ch1-1+View

Vitis vinifera

Gene id Description Chromosome Strand Multiplicon
VV15G05080name=GSVIVG01026944001;chr15-View


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Gene id
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Description
Chromosome
Strand