Gene: BR03G28210 (Brassica rapa)

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Gene Identifier
BR03G28210
Transcript Identifier
BR03G28210.1
Gene Type
Coding gene
Location
A03 : 14215766-14217025 : positive

Family

Gene family
HOM03D000125
(772 genes in 31 species)
specific family
Subfamily
ORTHO03D000281
(110 genes in 29 species)
specific family
Duplication type
Block duplicate

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Descriptions

Description (AnnoMine)
Probable aquaporin PIP-type pTOM75
Only text-mined description found ...
Description of best ortholog(s):

Identifiers

Identifier Name
protein_idBra000974

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0006810IEAInterProtransport
GO:0006833ISOPLAZA Integrative Orthologywater transportAT1G01620 AT3G61430 AT4G00430
GO:0009414ISOPLAZA Integrative Orthologyresponse to water deprivationAT1G01620 AT3G61430 AT4G00430
GO:0051234IEAPLAZA Homologyestablishment of localizationHOM03D000125
GO:0051179IEAPLAZA HomologylocalizationHOM03D000125

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0005215IEAInterProtransporter activity
GO:0015250ISOPLAZA Tree-based Orthologywater channel activityAT1G01620 AT3G61430
GO:0005515ISOPLAZA Tree-based Orthologyprotein bindingAT1G01620

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0016020IEAInterPromembrane
GO:0005773ISOPLAZA Tree-based OrthologyvacuoleAT3G61430
GO:0005739ISOPLAZA Tree-based OrthologymitochondrionAT3G61430
GO:0009941ISOPLAZA Tree-based Orthologychloroplast envelopeAT3G61430
GO:0009506ISOPLAZA Tree-based OrthologyplasmodesmaAT4G23400 AT3G61430
GO:0005886ISOPLAZA Integrative Orthologyplasma membraneAT4G23400 AT1G01620 AT3G61430 AT4G00430

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Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR000425Major intrinsic protein
IPR023271Aquaporin-like
IPR022357Major intrinsic protein, conserved site

Mapman id Description
34.19.1transport.Major Intrinsic Proteins.PIP
No SignalP domains detected for this gene.