Anchorpoints

Gene id
AL8G31890
Organism
Arabidopsis lyrata

Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
AL1G23720No description available.scaffold_1+View


Orthologs (inter-species colinear regions)

Arabidopsis thaliana

Gene id Description Chromosome Strand Multiplicon
AT5G64750ABA REPRESSOR1 (ABR1); CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: Integrase-type DNA-binding superfamily protein (TAIR:AT5G61890.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). Integrase-type DNA-binding superfamily protein Encodes a putative transcription factor containing an AP2 domain. Is a member of the ERF (ethylene response factor) subfamily B-4 of ERF/AP2 transcription factor family. Expressed in response to ABA, osmotic stress, sugar stress and drought. Mutants are hypersensitive to these stresses. May be involved in regulation of ABA mediated stress response.5+View
AT1G22190Integrase-type DNA-binding superfamily protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: related to AP2 4 (TAIR:AT1G78080.1); Has 5992 Blast hits to 5760 proteins in 260 species: Archae - 0; Bacteria - 10; Metazoa - 0; Fungi - 0; Plants - 5935; Viruses - 12; Other Eukaryotes - 35 (source: NCBI BLink). The gene encodes a putative transcription factor belongings to the abiotic stress-associated DREB A-6 clade. Integrase-type DNA-binding superfamily protein1+View
AT5G65130encodes a member of the DREB subfamily A-6 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 8 members in this subfamily including RAP2.4. Integrase-type DNA-binding superfamily protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: nucleus; EXPRESSED IN: embryo; EXPRESSED DURING: D bilateral stage; CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: Integrase-type DNA-binding superfamily protein (TAIR:AT4G39780.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). Integrase-type DNA-binding superfamily protein5+View

Brassica rapa

Gene id Description Chromosome Strand Multiplicon
BR06G23030No description available.A06+View

Beta vulgaris

Gene id Description Chromosome Strand Multiplicon
BV6G13290No description available.Bvchr6.sca004-View

Citrullus lanatus

Gene id Description Chromosome Strand Multiplicon
CL01G19140No description available.Chr1-View

Cucumis melo

Gene id Description Chromosome Strand Multiplicon
CM00007G07990No description available.CM3.5_scaffold00007-View

Capsella rubella

Gene id Description Chromosome Strand Multiplicon
CRU_001G20810No description available.scaffold_1+View
CRU_008G25200No description available.scaffold_8+View
CRU_002G23590No description available.scaffold_2+View

Citrus sinensis

Gene id Description Chromosome Strand Multiplicon
CS00099G00300No description available.scaffold00099-View

Eucalyptus grandis

Gene id Description Chromosome Strand Multiplicon
EG0009G03450No description available.scaffold_9-View

Fragaria vesca

Gene id Description Chromosome Strand Multiplicon
FV0G23270Ethylene-responsive transcription factor RAP2-4 (probable)scf0513168-View

Glycine max

Gene id Description Chromosome Strand Multiplicon
GM04G11290No description available.Gm04-View
GM05G31370No description available.Gm05-View
GM18G02170No description available.Gm18-View
GM08G14600No description available.Gm08-View

Gossypium raimondii

Gene id Description Chromosome Strand Multiplicon
GR10G04320No description available.Chr10-View
GR07G24070No description available.Chr07-View
GR03G03820No description available.Chr03+View

Lotus japonicus

Gene id Description Chromosome Strand Multiplicon
LJ4G043740No description available.chr4+View

Malus domestica

Gene id Description Chromosome Strand Multiplicon
MD01G002600No description available.1-View

Manihot esculenta

Gene id Description Chromosome Strand Multiplicon
ME12455G00440No description available.scaffold12455-View
ME07027G00090No description available.scaffold07027+View
ME08265G00630No description available.scaffold08265+View

Medicago truncatula

Gene id Description Chromosome Strand Multiplicon
MT8G090350ethylene response factorchr8-View

Oryza sativa ssp. japonica

Gene id Description Chromosome Strand Multiplicon
OS03G09170ethylene-responsive transcription factor, putative, expressed3-View
OS02G51670ethylene-responsive transcription factor, putative, expressed2+View
OS06G11860ethylene-responsive transcription factor, putative, expressed6-View

Prunus persica

Gene id Description Chromosome Strand Multiplicon
PPE_006G18900No description available.scaffold_6+View
PPE_001G51780No description available.scaffold_1+View

Populus trichocarpa

Gene id Description Chromosome Strand Multiplicon
PT05G07730No description available.Chr05-View
PT07G09060No description available.Chr07+View

Ricinus communis

Gene id Description Chromosome Strand Multiplicon
RC29908G01550No description available.29908+View

Solanum lycopersicum

Gene id Description Chromosome Strand Multiplicon
SL12G056980Ethylene responsive transcription factor 2b (AHRD V1 *-*- C0J9I6_9ROSA)%3B contains Interpro domain(s) IPR001471 Pathogenesis-related transcriptional factor and ERF%2C DNA-bindingch12+View
SL04G054910Ethylene-responsive transcription factor 13 (AHRD V1 *-*- ERF99_ARATH)%3B contains Interpro domain(s) IPR001471 Pathogenesis-related transcriptional factor and ERF%2C DNA-bindingch04+View
SL04G072900Ethylene responsive transcription factor 2b (AHRD V1 *-*- C0J9I6_9ROSA)%3B contains Interpro domain(s) IPR001471 Pathogenesis-related transcriptional factor and ERF%2C DNA-bindingch04+View

Solanum tuberosum

Gene id Description Chromosome Strand Multiplicon
ST04G026930Ethylene responsive transcription factor 2b (AHRD V1 *-*- C0J9I6_9ROSA); contains Interpro domain(s) IPR001471 Pathogenesis-related transcriptional factor and ERF, DNA-bindingchr04-View
ST04G020890Ethylene-responsive transcription factor 5 (AHRD V1 *-*- ERF5_NICSY); contains Interpro domain(s) IPR001471 Pathogenesis-related transcriptional factor and ERF, DNA-bindingchr04-View
ST12G025520Ethylene responsive transcription factor 2b (AHRD V1 *-*- C0J9I6_9ROSA); contains Interpro domain(s) IPR001471 Pathogenesis-related transcriptional factor and ERF, DNA-bindingchr12+View

Theobroma cacao

Gene id Description Chromosome Strand Multiplicon
TC0001G10020No description available.scaffold_1-View

Thellungiella parvula

Gene id Description Chromosome Strand Multiplicon
TP2G28210similar to AT5G65130|AP2 domain-containing transcription factor, putativech2-4+View
TP1G19690similar to AT1G22190|AP2 domain-containing transcription factor, putativech1-1+View

Zea mays

Gene id Description Chromosome Strand Multiplicon
ZM04G27660No description available.4-View
ZM05G40750LOC1002805535+View


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Gene id
Species
Description
Chromosome
Strand