Anchorpoints
- Gene id
- AL8G26720
- Organism
- Arabidopsis lyrata
Paralogs (intra-species colinear regions)
Orthologs (inter-species colinear regions)
Arabidopsis thaliana
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
AT5G03180 | RING/U-box superfamily protein RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, C3HC4 RING-type (InterPro:IPR018957), Zinc finger, RING-CH-type (InterPro:IPR011016); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT3G09760.1). | 5 | - | View |
AT5G60580 | RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Zinc finger, C3HC4 RING-type (InterPro:IPR018957), Zinc finger, RING-CH-type (InterPro:IPR011016); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT3G09760.1); Has 1580 Blast hits to 1234 proteins in 158 species: Archae - 0; Bacteria - 10; Metazoa - 420; Fungi - 112; Plants - 626; Viruses - 18; Other Eukaryotes - 394 (source: NCBI BLink). RING/U-box superfamily protein | 5 | + | View |
Brassica rapa
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
BR10G13130 | No description available. | A10 | + | View |
BR02G11530 | No description available. | A02 | - | View |
Beta vulgaris
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
BV9G12000 | No description available. | Bvchr9.sca013 | - | View |
BV7G14150 | No description available. | Bvchr7.sca004 | + | View |
Citrullus lanatus
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CL03G02230 | No description available. | Chr3 | - | View |
CL10G18370 | No description available. | Chr10 | + | View |
CL02G21250 | No description available. | Chr2 | + | View |
Cucumis melo
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CM00082G00950 | No description available. | CM3.5_scaffold00082 | + | View |
CM00011G02600 | No description available. | CM3.5_scaffold00011 | - | View |
Carica papaya
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CP00216G00140 | No description available. | supercontig_216 | - | View |
Capsella rubella
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CRU_006G01990 | No description available. | scaffold_6 | - | View |
CRU_008G20650 | No description available. | scaffold_8 | + | View |
Citrus sinensis
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CS00014G02130 | No description available. | scaffold00014 | + | View |
Eucalyptus grandis
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
EG0002G20090 | No description available. | scaffold_2 | + | View |
EG0010G08230 | No description available. | scaffold_10 | - | View |
Fragaria vesca
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
FV3G37830 | Probable E3 ubiquitin-protein ligase MARCH10 | LG3 | + | View |
Glycine max
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
GM13G40150 | No description available. | Gm13 | - | View |
GM10G05910 | No description available. | Gm10 | - | View |
GM11G20650 | No description available. | Gm11 | - | View |
GM19G36490 | No description available. | Gm19 | - | View |
GM12G29600 | No description available. | Gm12 | - | View |
GM12G07290 | No description available. | Gm12 | - | View |
GM03G33750 | No description available. | Gm03 | - | View |
GM13G20250 | No description available. | Gm13 | - | View |
Gossypium raimondii
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
GR09G10630 | No description available. | Chr09 | + | View |
GR02G24860 | No description available. | Chr02 | + | View |
GR04G22850 | No description available. | Chr04 | + | View |
Lotus japonicus
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
LJ3G044250 | No description available. | chr3 | - | View |
Malus domestica
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
MD03G008810 | No description available. | 3 | + | View |
Manihot esculenta
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
ME06327G00180 | No description available. | scaffold06327 | - | View |
ME02960G00630 | No description available. | scaffold02960 | - | View |
ME03750G01000 | No description available. | scaffold03750 | + | View |
Medicago truncatula
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
MT2G094130 | RING/U-box protein | chr2 | + | View |
MT4G459440 | RING/U-box protein C putative | chr4 | - | View |
Prunus persica
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
PPE_006G09920 | No description available. | scaffold_6 | + | View |
Populus trichocarpa
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
PT06G12900 | No description available. | Chr06 | + | View |
PT09G01330 | No description available. | Chr09 | + | View |
Ricinus communis
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
RC28076G00100 | No description available. | 28076 | - | View |
Solanum lycopersicum
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
SL11G069350 | Zinc finger family protein (AHRD V1 **-- D7MTV5_ARALY)%3B contains Interpro domain(s) IPR011016 Zinc finger%2C RING-CH-type | ch11 | + | View |
Solanum tuberosum
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
ST11G026210 | Zinc finger family protein (AHRD V1 **-* D7MTV5_ARALY); contains Interpro domain(s) IPR011016 Zinc finger, RING-CH-type | chr11 | + | View |
ST06G010430 | Zinc finger family protein (AHRD V1 **-* D7MTV5_ARALY); contains Interpro domain(s) IPR011016 Zinc finger, RING-CH-type | chr06 | - | View |
Theobroma cacao
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
TC0009G33360 | No description available. | scaffold_9 | + | View |
Thellungiella parvula
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
TP6G39540 | similar to AT5G03180|zinc finger (C3HC4-type RING finger) family protein | ch6-6 | + | View |
TP6G22150 | similar to AT5G60580|zinc finger (C3HC4-type RING finger) family protein | ch6-6 | + | View |
Vitis vinifera
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
VV06G05310 | name=GSVIVG01025179001; | chr6 | - | View |
VV08G02780 | name=GSVIVG01025673001; | chr8 | + | View |