Anchorpoints

Gene id
AL8G06550
Organism
Arabidopsis lyrata

Paralogs (intra-species colinear regions)

No paralogous anchorpoints available


Orthologs (inter-species colinear regions)

Arabidopsis thaliana

Gene id Description Chromosome Strand Multiplicon
AT5G43530Helicase protein with RING/U-box domain Helicase protein with RING/U-box domain; FUNCTIONS IN: in 6 functions; LOCATED IN: chloroplast envelope; EXPRESSED IN: shoot apex, embryo, male gametophyte, flower, seed; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type, conserved site (InterPro:IPR017907), Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021), HIP116, Rad5p N-terminal (InterPro:IPR014905), SNF2-related (InterPro:IPR000330); BEST Arabidopsis thaliana protein match is: DNA/RNA helicase protein (TAIR:AT5G22750.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).5+View

Brassica rapa

Gene id Description Chromosome Strand Multiplicon
BR06G38650No description available.A06-View

Cucumis melo

Gene id Description Chromosome Strand Multiplicon
CM00006G05480No description available.CM3.5_scaffold00006+View

Carica papaya

Gene id Description Chromosome Strand Multiplicon
CP00044G00830No description available.supercontig_44+View

Capsella rubella

Gene id Description Chromosome Strand Multiplicon
CRU_008G05000No description available.scaffold_8-View

Eucalyptus grandis

Gene id Description Chromosome Strand Multiplicon
EG0008G25440No description available.scaffold_8+View

Glycine max

Gene id Description Chromosome Strand Multiplicon
GM10G01091No description available.Gm10+View

Gossypium raimondii

Gene id Description Chromosome Strand Multiplicon
GR06G24880No description available.Chr06-View

Manihot esculenta

Gene id Description Chromosome Strand Multiplicon
ME01551G01210No description available.scaffold01551+View

Prunus persica

Gene id Description Chromosome Strand Multiplicon
PPE_001G03360No description available.scaffold_1-View

Populus trichocarpa

Gene id Description Chromosome Strand Multiplicon
PT10G07380No description available.Chr10+View

Ricinus communis

Gene id Description Chromosome Strand Multiplicon
RC29603G00210No description available.29603+View

Solanum lycopersicum

Gene id Description Chromosome Strand Multiplicon
SL03G005460DNA helicase (AHRD V1 **-- C4R4A1_PICPG)%3B contains Interpro domain(s) IPR000330 SNF2-relatedch03-View

Solanum tuberosum

Gene id Description Chromosome Strand Multiplicon
ST03G005660DNA repair protein rad5 (AHRD V1 **-- E4V3P7_ARTGP); contains Interpro domain(s) IPR000330 SNF2-relatedchr03-View

Theobroma cacao

Gene id Description Chromosome Strand Multiplicon
TC0004G25280No description available.scaffold_4-View

Thellungiella parvula

Gene id Description Chromosome Strand Multiplicon
TP2G08360similar to AT5G43530|SNF2 domain-containing protein / helicase domain-containing protein / RING finger domain-containing proteinch2-4+View

Vitis vinifera

Gene id Description Chromosome Strand Multiplicon
VV05G07630name=GSVIVG01027728001;chr5-View


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Gene id
Species
Description
Chromosome
Strand