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Gene family finder
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Synteny plot
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Functional clusters
WGMapping
BLAST
WorkbenchAnchorpoints
- Gene id
- AL7G19120
- Organism
- Arabidopsis lyrata
Paralogs (intra-species colinear regions)
Orthologs (inter-species colinear regions)
Arabidopsis thaliana
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| AT1G12750 | RHOMBOID-like protein 6 RHOMBOID-like protein 6 (RBL6); FUNCTIONS IN: serine-type endopeptidase activity; INVOLVED IN: biological_process unknown; LOCATED IN: integral to membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase S54, rhomboid (InterPro:IPR002610); BEST Arabidopsis thaliana protein match is: RHOMBOID-like 2 (TAIR:AT1G63120.1); Has 6272 Blast hits to 6271 proteins in 1782 species: Archae - 138; Bacteria - 3818; Metazoa - 537; Fungi - 159; Plants - 344; Viruses - 0; Other Eukaryotes - 1276 (source: NCBI BLink). | 1 | - | View |
| AT4G23070 | RHOMBOID-like protein 7 (RBL7); FUNCTIONS IN: serine-type endopeptidase activity; INVOLVED IN: biological_process unknown; LOCATED IN: integral to membrane; EXPRESSED IN: root, pollen tube; CONTAINS InterPro DOMAIN/s: Peptidase S54, rhomboid (InterPro:IPR002610); BEST Arabidopsis thaliana protein match is: RHOMBOID-like protein 6 (TAIR:AT1G12750.3); Has 5309 Blast hits to 5308 proteins in 1628 species: Archae - 134; Bacteria - 3233; Metazoa - 520; Fungi - 126; Plants - 324; Viruses - 0; Other Eukaryotes - 972 (source: NCBI BLink). RHOMBOID-like protein 7 | 4 | - | View |
Brassica rapa
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| BR01G13180 | No description available. | A01 | - | View |
Beta vulgaris
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| BV5G07840 | No description available. | Bvchr5.sca002 | + | View |
Citrullus lanatus
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| CL01G02840 | No description available. | Chr1 | + | View |
Cucumis melo
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| CM00005G06100 | No description available. | CM3.5_scaffold00005 | - | View |
| CM00006G10010 | No description available. | CM3.5_scaffold00006 | - | View |
Capsella rubella
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| CRU_001G11860 | No description available. | scaffold_1 | - | View |
| CRU_007G17310 | No description available. | scaffold_7 | + | View |
Citrus sinensis
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| CS00040G00130 | No description available. | scaffold00040 | + | View |
Eucalyptus grandis
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| EG0005G04850 | No description available. | scaffold_5 | - | View |
| EG0004G15490 | No description available. | scaffold_4 | + | View |
Gossypium raimondii
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| GR04G20850 | No description available. | Chr04 | - | View |
| GR08G24420 | No description available. | Chr08 | - | View |
| GR03G16120 | No description available. | Chr03 | + | View |
Malus domestica
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| MD06G006760 | No description available. | 6 | + | View |
| MD01G018890 | No description available. | 1 | - | View |
Manihot esculenta
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| ME07035G00280 | No description available. | scaffold07035 | + | View |
Prunus persica
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| PPE_005G10150 | No description available. | scaffold_5 | - | View |
Populus trichocarpa
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| PT01G10870 | No description available. | Chr01 | + | View |
| PT03G12290 | No description available. | Chr03 | - | View |
Solanum lycopersicum
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| SL08G080500 | Rhomboid family protein (AHRD V1 ***- D7M0H4_ARALY)%3B contains Interpro domain(s) IPR002610 Peptidase S54%2C rhomboid | ch08 | - | View |
Solanum tuberosum
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| ST08G026550 | Rhomboid family protein (AHRD V1 **-- D7M0H4_ARALY); contains Interpro domain(s) IPR002610 Peptidase S54, rhomboid | chr08 | - | View |
Theobroma cacao
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| TC0003G26900 | No description available. | scaffold_3 | - | View |
Thellungiella parvula
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| TP2G01460 | similar to AT1G63120|ATRBL2 (Arabidopsis thaliana Rhomboid-like 2) | ch2-1 | + | View |
| TP1G11310 | similar to AT1G12750|ATRBL6 (ARABIDOPSIS RHOMBOID-LIKE PROTEIN 6) | ch1-1 | - | View |
| TP7G21150 | similar to AT4G23070|ATRBL7 (ARABIDOPSIS RHOMBOID-LIKE PROTEIN 7) | ch7-4 | - | View |
Vitis vinifera
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| VV02G07010 | name=GSVIVG01019824001; | chr2 | - | View |