Anchorpoints

Gene id
AL6G39910
Organism
Arabidopsis lyrata

Paralogs (intra-species colinear regions)

No paralogous anchorpoints available


Orthologs (inter-species colinear regions)

Arabidopsis thaliana

Gene id Description Chromosome Strand Multiplicon
AT4G01630expansin A17 (EXPA17); INVOLVED IN: plant-type cell wall modification involved in multidimensional cell growth, unidimensional cell growth, plant-type cell wall loosening; LOCATED IN: endomembrane system, extracellular region; EXPRESSED IN: hypocotyl, root; CONTAINS InterPro DOMAIN/s: Barwin-related endoglucanase (InterPro:IPR009009), Pollen allergen, N-terminal (InterPro:IPR014734), Expansin (InterPro:IPR002963), Rare lipoprotein A (InterPro:IPR005132), Expansin/Lol pI (InterPro:IPR007118), Expansin 45, endoglucanase-like (InterPro:IPR007112), Pollen allergen/expansin, C-terminal (InterPro:IPR007117); BEST Arabidopsis thaliana protein match is: expansin A14 (TAIR:AT5G56320.1); Has 2142 Blast hits to 2139 proteins in 150 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 24; Plants - 2075; Viruses - 0; Other Eukaryotes - 43 (source: NCBI BLink). member of Alpha-Expansin Gene Family. Naming convention from the Expansin Working Group (Kende et al, 2004. Plant Mol Bio) expansin A174+View

Brassica rapa

Gene id Description Chromosome Strand Multiplicon
BR03G27670No description available.A03-View

Carica papaya

Gene id Description Chromosome Strand Multiplicon
CP00057G00480No description available.supercontig_57-View

Capsella rubella

Gene id Description Chromosome Strand Multiplicon
CRU_006G34330No description available.scaffold_6-View
CRU_001G01230No description available.scaffold_1+View

Citrus sinensis

Gene id Description Chromosome Strand Multiplicon
CS00001G05510No description available.scaffold00001+View

Eucalyptus grandis

Gene id Description Chromosome Strand Multiplicon
EG0001G07840No description available.scaffold_1+View

Glycine max

Gene id Description Chromosome Strand Multiplicon
GM19G41080No description available.Gm19-View
GM03G38480No description available.Gm03-View

Gossypium raimondii

Gene id Description Chromosome Strand Multiplicon
GR01G14890No description available.Chr01-View
GR04G14820No description available.Chr04-View
GR07G11890No description available.Chr07-View

Manihot esculenta

Gene id Description Chromosome Strand Multiplicon
ME00080G00720No description available.scaffold00080-View
ME07571G00390No description available.scaffold07571+View

Medicago truncatula

Gene id Description Chromosome Strand Multiplicon
MT7G110990expansin A1chr7-View
MT1G085365expansin A2chr1+View

Populus trichocarpa

Gene id Description Chromosome Strand Multiplicon
PT02G18470No description available.Chr02+View

Ricinus communis

Gene id Description Chromosome Strand Multiplicon
RC30076G00790No description available.30076+View

Theobroma cacao

Gene id Description Chromosome Strand Multiplicon
TC0001G32600No description available.scaffold_1-View

Thellungiella parvula

Gene id Description Chromosome Strand Multiplicon
TP1G01400similar to AT4G01630|ATEXPA17 (ARABIDOPSIS THALIANA EXPANSIN A17)ch1-1+View
TP6G01530similar to AT4G01630|ATEXPA17 (ARABIDOPSIS THALIANA EXPANSIN A17)ch6-1+View


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Gene id
Species
Description
Chromosome
Strand