Anchorpoints

Gene id
AL6G19620
Organism
Arabidopsis lyrata

Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
AL6G12060No description available.scaffold_6+View


Orthologs (inter-species colinear regions)

Arabidopsis thaliana

Gene id Description Chromosome Strand Multiplicon
AT5G19360calcium-dependent protein kinase 34 (CPK34); FUNCTIONS IN: in 6 functions; INVOLVED IN: regulation of pollen tube growth, protein amino acid phosphorylation, N-terminal protein myristoylation; LOCATED IN: plasma membrane, cytoplasm; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), EF-Hand 1, calcium-binding site (InterPro:IPR018247), Serine/threonine-protein kinase domain (InterPro:IPR002290), Calcium-binding EF-hand (InterPro:IPR002048), EF-hand-like domain (InterPro:IPR011992), EF-hand (InterPro:IPR018248), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), EF-HAND 2 (InterPro:IPR018249), Calcium-dependent protein kinase (InterPro:IPR020642), Calcium/calmodulin-dependent protein kinase-like (InterPro:IPR020636); BEST Arabidopsis thaliana protein match is: calcium-dependent protein kinase 17 (TAIR:AT5G12180.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). calcium-dependent protein kinase 34 member of Calcium Dependent Protein Kinase5-View
AT5G12480calmodulin-domain protein kinase CDPK isoform 7 (CPK7) calmodulin-domain protein kinase 7 calmodulin-domain protein kinase 7 (CPK7); FUNCTIONS IN: in 6 functions; INVOLVED IN: protein amino acid phosphorylation, N-terminal protein myristoylation; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), EF-Hand 1, calcium-binding site (InterPro:IPR018247), Serine/threonine-protein kinase domain (InterPro:IPR002290), Calcium-binding EF-hand (InterPro:IPR002048), EF-hand-like domain (InterPro:IPR011992), EF-hand (InterPro:IPR018248), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), EF-HAND 2 (InterPro:IPR018249), Calcium-dependent protein kinase (InterPro:IPR020642), Calcium/calmodulin-dependent protein kinase-like (InterPro:IPR020636), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: calcium-dependent protein kinase 19 (TAIR:AT5G19450.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).5-View

Brassica rapa

Gene id Description Chromosome Strand Multiplicon
BR02G09480No description available.A02-View
BR10G21450No description available.A10+View
BR10G15450No description available.A10+View

Beta vulgaris

Gene id Description Chromosome Strand Multiplicon
BV4G13950No description available.Bvchr4.sca001+View

Citrullus lanatus

Gene id Description Chromosome Strand Multiplicon
CL02G22860No description available.Chr2-View

Cucumis melo

Gene id Description Chromosome Strand Multiplicon
CM00022G03840No description available.CM3.5_scaffold00022-View

Carica papaya

Gene id Description Chromosome Strand Multiplicon
CP00157G00550No description available.supercontig_157-View

Capsella rubella

Gene id Description Chromosome Strand Multiplicon
CRU_006G17250No description available.scaffold_6-View
CRU_006G10400No description available.scaffold_6+View

Eucalyptus grandis

Gene id Description Chromosome Strand Multiplicon
EG0002G31300No description available.scaffold_2+View
EG0010G06030No description available.scaffold_10-View

Fragaria vesca

Gene id Description Chromosome Strand Multiplicon
FV2G47790Calcium-dependent protein kinase 17 (similar to)LG2-View

Glycine max

Gene id Description Chromosome Strand Multiplicon
GM02G44720No description available.Gm02-View
GM14G04010No description available.Gm14+View
GM07G36000No description available.Gm07-View
GM20G08140No description available.Gm20+View
GM17G01730No description available.Gm17-View

Gossypium raimondii

Gene id Description Chromosome Strand Multiplicon
GR06G12480No description available.Chr06-View
GR13G25310No description available.Chr13+View

Manihot esculenta

Gene id Description Chromosome Strand Multiplicon
ME07991G00100No description available.scaffold07991-View
ME06916G01220No description available.scaffold06916+View

Medicago truncatula

Gene id Description Chromosome Strand Multiplicon
MT5G089320calmodulin-domain kinase CDPK proteinchr5-View

Prunus persica

Gene id Description Chromosome Strand Multiplicon
PPE_004G28940No description available.scaffold_4-View

Populus trichocarpa

Gene id Description Chromosome Strand Multiplicon
PT09G06920No description available.Chr09-View
PT01G27470No description available.Chr01-View

Ricinus communis

Gene id Description Chromosome Strand Multiplicon
RC30142G00240No description available.30142-View

Solanum lycopersicum

Gene id Description Chromosome Strand Multiplicon
SL11G064900Calcium-dependent protein kinase 1 (AHRD V1 **** Q3YAS9_PETIN)%3B contains Interpro domain(s) IPR002290 Serine/threonine protein kinasech11-View

Solanum tuberosum

Gene id Description Chromosome Strand Multiplicon
ST11G020700Calcium-dependent protein kinase 17 (AHRD V1 **** Q6KC53_NICPL); contains Interpro domain(s) IPR002290 Serine/threonine protein kinasechr11+View

Theobroma cacao

Gene id Description Chromosome Strand Multiplicon
TC0009G24350No description available.scaffold_9+View

Thellungiella parvula

Gene id Description Chromosome Strand Multiplicon
TP6G31120similar to AT5G12480|CPK7 (calmodulin-domain protein kinase 7)ch6-6+View
TP6G24960similar to AT5G19450|CDPK19 (CALCIUM-DEPENDENT PROTEIN KINASE 19)ch6-6+View

Vitis vinifera

Gene id Description Chromosome Strand Multiplicon
VV06G11020name=GSVIVG01037295001;chr6-View


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Chromosome
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