Anchorpoints
- Gene id
- AL6G17350
- Organism
- Arabidopsis lyrata
Paralogs (intra-species colinear regions)
Orthologs (inter-species colinear regions)
Arabidopsis thaliana
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
AT3G03400 | EF hand calcium-binding protein family; FUNCTIONS IN: calcium ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: central cell; CONTAINS InterPro DOMAIN/s: EF-Hand 1, calcium-binding site (InterPro:IPR018247), EF-HAND 2 (InterPro:IPR018249), EF-hand-like domain (InterPro:IPR011992), Calcium-binding EF-hand (InterPro:IPR002048), EF-hand (InterPro:IPR018248); BEST Arabidopsis thaliana protein match is: EF hand calcium-binding protein family (TAIR:AT5G17470.1); Has 13690 Blast hits to 10114 proteins in 1236 species: Archae - 0; Bacteria - 48; Metazoa - 5217; Fungi - 2887; Plants - 3646; Viruses - 0; Other Eukaryotes - 1892 (source: NCBI BLink). EF hand calcium-binding protein family | 3 | - | View |
AT5G17470 | EF hand calcium-binding protein family EF hand calcium-binding protein family; FUNCTIONS IN: calcium ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: petal, leaf whorl, sepal, flower; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: EF-Hand 1, calcium-binding site (InterPro:IPR018247), EF-HAND 2 (InterPro:IPR018249), EF-hand-like domain (InterPro:IPR011992), Calcium-binding EF-hand (InterPro:IPR002048), EF-hand (InterPro:IPR018248); BEST Arabidopsis thaliana protein match is: EF hand calcium-binding protein family (TAIR:AT2G36180.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). | 5 | - | View |
Brassica rapa
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
BR02G08480 | Polcalcin Bra r 1 | A02 | + | View |
BR03G29230 | No description available. | A03 | + | View |
BR02G39790 | No description available. | A02 | + | View |
Capsella rubella
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CRU_003G02430 | No description available. | scaffold_3 | - | View |
CRU_006G15320 | No description available. | scaffold_6 | - | View |
Citrus sinensis
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CS00091G00330 | No description available. | scaffold00091 | + | View |
Gossypium raimondii
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
GR01G08690 | No description available. | Chr01 | - | View |
GR13G20110 | No description available. | Chr13 | + | View |
Lotus japonicus
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
LJ1G055820 | No description available. | chr1 | - | View |
Solanum lycopersicum
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
SL03G097100 | Calmodulin (AHRD V1 ***- B6UHC3_MAIZE)%3B contains Interpro domain(s) IPR003299 Flagellar calcium-binding protein (calflagin) | ch03 | + | View |
Solanum tuberosum
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
ST03G017750 | Calmodulin (AHRD V1 ***- B6UHC3_MAIZE); contains Interpro domain(s) IPR011992 EF-Hand type | chr03 | + | View |
ST10G026960 | Calmodulin-2 (AHRD V1 ***- D7LFI7_ARALY); contains Interpro domain(s) IPR011992 EF-Hand type | chr10 | + | View |
Thellungiella parvula
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
TP3G02400 | similar to AT3G03400|calmodulin-related protein, putative | ch3-1 | - | View |
TP6G26740 | similar to AT5G17480|APC1 (ARABIDOPSIS POLLEN CALCIUM-BINDING PROTEIN 1) | ch6-6 | - | View |
Vitis vinifera
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
VV08G04690 | name=GSVIVG01029852001; | chr8 | + | View |