Anchorpoints

Gene id
AL6G17350
Organism
Arabidopsis lyrata

Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
AL3G02750No description available.scaffold_3-View


Orthologs (inter-species colinear regions)

Arabidopsis thaliana

Gene id Description Chromosome Strand Multiplicon
AT3G03400EF hand calcium-binding protein family; FUNCTIONS IN: calcium ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: central cell; CONTAINS InterPro DOMAIN/s: EF-Hand 1, calcium-binding site (InterPro:IPR018247), EF-HAND 2 (InterPro:IPR018249), EF-hand-like domain (InterPro:IPR011992), Calcium-binding EF-hand (InterPro:IPR002048), EF-hand (InterPro:IPR018248); BEST Arabidopsis thaliana protein match is: EF hand calcium-binding protein family (TAIR:AT5G17470.1); Has 13690 Blast hits to 10114 proteins in 1236 species: Archae - 0; Bacteria - 48; Metazoa - 5217; Fungi - 2887; Plants - 3646; Viruses - 0; Other Eukaryotes - 1892 (source: NCBI BLink). EF hand calcium-binding protein family3-View
AT5G17470EF hand calcium-binding protein family EF hand calcium-binding protein family; FUNCTIONS IN: calcium ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: petal, leaf whorl, sepal, flower; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: EF-Hand 1, calcium-binding site (InterPro:IPR018247), EF-HAND 2 (InterPro:IPR018249), EF-hand-like domain (InterPro:IPR011992), Calcium-binding EF-hand (InterPro:IPR002048), EF-hand (InterPro:IPR018248); BEST Arabidopsis thaliana protein match is: EF hand calcium-binding protein family (TAIR:AT2G36180.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).5-View

Brassica rapa

Gene id Description Chromosome Strand Multiplicon
BR02G08480Polcalcin Bra r 1A02+View
BR03G29230No description available.A03+View
BR02G39790No description available.A02+View

Capsella rubella

Gene id Description Chromosome Strand Multiplicon
CRU_003G02430No description available.scaffold_3-View
CRU_006G15320No description available.scaffold_6-View

Citrus sinensis

Gene id Description Chromosome Strand Multiplicon
CS00091G00330No description available.scaffold00091+View

Gossypium raimondii

Gene id Description Chromosome Strand Multiplicon
GR01G08690No description available.Chr01-View
GR13G20110No description available.Chr13+View

Lotus japonicus

Gene id Description Chromosome Strand Multiplicon
LJ1G055820No description available.chr1-View

Solanum lycopersicum

Gene id Description Chromosome Strand Multiplicon
SL03G097100Calmodulin (AHRD V1 ***- B6UHC3_MAIZE)%3B contains Interpro domain(s) IPR003299 Flagellar calcium-binding protein (calflagin)ch03+View

Solanum tuberosum

Gene id Description Chromosome Strand Multiplicon
ST03G017750Calmodulin (AHRD V1 ***- B6UHC3_MAIZE); contains Interpro domain(s) IPR011992 EF-Hand typechr03+View
ST10G026960Calmodulin-2 (AHRD V1 ***- D7LFI7_ARALY); contains Interpro domain(s) IPR011992 EF-Hand typechr10+View

Thellungiella parvula

Gene id Description Chromosome Strand Multiplicon
TP3G02400similar to AT3G03400|calmodulin-related protein, putativech3-1-View
TP6G26740similar to AT5G17480|APC1 (ARABIDOPSIS POLLEN CALCIUM-BINDING PROTEIN 1)ch6-6-View

Vitis vinifera

Gene id Description Chromosome Strand Multiplicon
VV08G04690name=GSVIVG01029852001;chr8+View


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Gene id
Species
Description
Chromosome
Strand