Anchorpoints

Gene id
AL6G15040
Organism
Arabidopsis lyrata

Paralogs (intra-species colinear regions)

No paralogous anchorpoints available


Orthologs (inter-species colinear regions)

Arabidopsis thaliana

Gene id Description Chromosome Strand Multiplicon
AT5G39760homeobox protein 23 (HB23); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Homeobox domain, ZF-HD class (InterPro:IPR006455), ZF-HD homeobox protein, Cys/His-rich dimerisation domain (InterPro:IPR006456), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: homeobox protein 34 (TAIR:AT3G28920.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). homeobox protein 235+View
AT1G69600zinc finger homeodomain 1 (ZFHD1); CONTAINS InterPro DOMAIN/s: Homeobox domain, ZF-HD class (InterPro:IPR006455), ZF-HD homeobox protein, Cys/His-rich dimerisation domain (InterPro:IPR006456), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: homeobox protein 26 (TAIR:AT5G60480.1); Has 480 Blast hits to 471 proteins in 33 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 480; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). zinc finger homeodomain 1 Encodes ZFHD1, a member of the zinc finger homeodomain transcriptional factor family. Binds to the 62 bp promoter region of ERD1 (early responsive to dehydration stress 1). Expression of ZFHD1 is induced by drought, high salinity and abscisic acid.1+View
AT5G15210homeobox protein 30 homeobox protein 30 (HB30); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Homeobox domain, ZF-HD class (InterPro:IPR006455), ZF-HD homeobox protein, Cys/His-rich dimerisation domain (InterPro:IPR006456), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: homeobox protein 34 (TAIR:AT3G28920.1); Has 512 Blast hits to 491 proteins in 41 species: Archae - 0; Bacteria - 0; Metazoa - 36; Fungi - 0; Plants - 474; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). Encodes ZFHD3, a member of the zinc finger homeodomain transcriptional factor family.5-View

Brassica rapa

Gene id Description Chromosome Strand Multiplicon
BR02G19910No description available.A02+View
BR10G19780No description available.A10+View

Citrullus lanatus

Gene id Description Chromosome Strand Multiplicon
CL10G13140No description available.Chr10-View
CL09G18710No description available.Chr9+View

Cucumis melo

Gene id Description Chromosome Strand Multiplicon
CM00016G04190No description available.CM3.5_scaffold00016-View
CM00011G08200No description available.CM3.5_scaffold00011+View
CM00051G00280No description available.CM3.5_scaffold00051-View

Capsella rubella

Gene id Description Chromosome Strand Multiplicon
CRU_007G34690No description available.scaffold_7-View
CRU_006G13070No description available.scaffold_6-View

Eucalyptus grandis

Gene id Description Chromosome Strand Multiplicon
EG0011G20580No description available.scaffold_11+View
EG0009G16300No description available.scaffold_9+View
EG0010G11820No description available.scaffold_10-View

Fragaria vesca

Gene id Description Chromosome Strand Multiplicon
FV6G44540ZF-HD homeobox protein At5g65410 (probable)LG6+View

Glycine max

Gene id Description Chromosome Strand Multiplicon
GM09G37300No description available.Gm09+View
GM13G05380No description available.Gm13+View
GM19G02610No description available.Gm19+View

Gossypium raimondii

Gene id Description Chromosome Strand Multiplicon
GR13G08550No description available.Chr13-View
GR12G05430No description available.Chr12+View
GR06G01720No description available.Chr06+View

Lotus japonicus

Gene id Description Chromosome Strand Multiplicon
LJ2G017150No description available.chr2+View

Malus domestica

Gene id Description Chromosome Strand Multiplicon
MD09G003650No description available.9+View

Manihot esculenta

Gene id Description Chromosome Strand Multiplicon
ME11341G00710No description available.scaffold11341+View

Medicago truncatula

Gene id Description Chromosome Strand Multiplicon
MT6G012220ZF-HD protein dimerization region proteinchr6+View

Prunus persica

Gene id Description Chromosome Strand Multiplicon
PPE_003G24670No description available.scaffold_3+View

Populus trichocarpa

Gene id Description Chromosome Strand Multiplicon
PT17G08270No description available.Chr17+View

Solanum lycopersicum

Gene id Description Chromosome Strand Multiplicon
SL02G067310Zinc finger-homeodomain protein 1 (Fragment) (AHRD V1 **-- B0LK19_CUCSA)%3B contains Interpro domain(s) IPR006456 ZF-HD homeobox protein Cys/His-rich dimerisation regionch02+View
SL02G087970Zinc finger-homeodomain protein 1 (Fragment) (AHRD V1 **-- B0LK17_YUCFI)%3B contains Interpro domain(s) IPR006456 ZF-HD homeobox protein Cys/His-rich dimerisation regionch02+View

Solanum tuberosum

Gene id Description Chromosome Strand Multiplicon
ST02G034890Zinc finger-homeodomain protein 1 (Fragment) (AHRD V1 **-- B0LK17_YUCFI); contains Interpro domain(s) IPR006456 ZF-HD homeobox protein Cys/His-rich dimerisation regionchr02-View
ST02G013170Zinc finger-homeodomain protein 1 (Fragment) (AHRD V1 **-- B0LK19_CUCSA); contains Interpro domain(s) IPR006456 ZF-HD homeobox protein Cys/His-rich dimerisation regionchr02+View

Thellungiella parvula

Gene id Description Chromosome Strand Multiplicon
TP7G02270similar to AT5G39760|AtHB23 (ARABIDOPSIS THALIANA HOMEOBOX PROTEIN 23)ch7-1-View
TP6G28860similar to AT5G15210|ATHB30 (ARABIDOPSIS THALIANA HOMEOBOX PROTEIN 30)ch6-6+View

Vitis vinifera

Gene id Description Chromosome Strand Multiplicon
VV14G02170name=GSVIVG01011413001;chr14+View


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Description
Chromosome
Strand