Anchorpoints

Gene id
AL6G02150
Organism
Arabidopsis lyrata

Paralogs (intra-species colinear regions)

No paralogous anchorpoints available


Orthologs (inter-species colinear regions)

Arabidopsis thaliana

Gene id Description Chromosome Strand Multiplicon
AT5G03040IQ-domain 2 (iqd2); FUNCTIONS IN: calmodulin binding; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: IQ calmodulin-binding region (InterPro:IPR000048); BEST Arabidopsis thaliana protein match is: IQ-domain 1 (TAIR:AT3G09710.1); Has 1155 Blast hits to 1120 proteins in 81 species: Archae - 0; Bacteria - 2; Metazoa - 71; Fungi - 33; Plants - 987; Viruses - 0; Other Eukaryotes - 62 (source: NCBI BLink). IQ-domain 25-View
AT3G09710IQ-domain 1 Ca(2+)-dependent calmodulin-binding protein. Targeted to the nucleus. Involved in glucosinolate metabolism in response to biotic challenge. Expressed in vascular tissue. IQ-domain 1 (IQD1); FUNCTIONS IN: calmodulin binding; INVOLVED IN: glucosinolate biosynthetic process, defense response; LOCATED IN: nucleus; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: IQ calmodulin-binding region (InterPro:IPR000048); BEST Arabidopsis thaliana protein match is: IQ-domain 2 (TAIR:AT5G03040.3).3-View

Brassica rapa

Gene id Description Chromosome Strand Multiplicon
BR03G31450No description available.A03+View
BR01G38830No description available.A01+View
BR10G28190No description available.A10+View
BR02G03130No description available.A02-View

Citrullus lanatus

Gene id Description Chromosome Strand Multiplicon
CL10G18490No description available.Chr10+View
CL05G21980No description available.Chr5-View
CL04G08690No description available.Chr4-View

Cucumis melo

Gene id Description Chromosome Strand Multiplicon
CM00016G07880No description available.CM3.5_scaffold00016+View
CM00022G00620No description available.CM3.5_scaffold00022+View
CM00011G02470No description available.CM3.5_scaffold00011-View

Capsella rubella

Gene id Description Chromosome Strand Multiplicon
CRU_003G08410No description available.scaffold_3-View
CRU_006G01790No description available.scaffold_6-View

Citrus sinensis

Gene id Description Chromosome Strand Multiplicon
CS00115G00210No description available.scaffold00115-View

Eucalyptus grandis

Gene id Description Chromosome Strand Multiplicon
EG0001G09480No description available.scaffold_1-View

Glycine max

Gene id Description Chromosome Strand Multiplicon
GM13G20070No description available.Gm13-View
GM10G35721No description available.Gm10+View
GM10G05720No description available.Gm10-View
GM20G31810No description available.Gm20-View
GM03G33560No description available.Gm03-View
GM19G36270No description available.Gm19-View

Gossypium raimondii

Gene id Description Chromosome Strand Multiplicon
GR02G24970No description available.Chr02+View
GR09G42020No description available.Chr09+View
GR01G24820No description available.Chr01+View

Lotus japonicus

Gene id Description Chromosome Strand Multiplicon
LJ1G063850No description available.chr1-View
LJ5G010550No description available.chr5-View

Manihot esculenta

Gene id Description Chromosome Strand Multiplicon
ME05133G00130No description available.scaffold05133-View

Medicago truncatula

Gene id Description Chromosome Strand Multiplicon
MT7G100790IQ calmodulin-binding motif proteinchr7-View
MT1G066800IQ calmodulin-binding motif proteinchr1+View

Prunus persica

Gene id Description Chromosome Strand Multiplicon
PPE_006G24800No description available.scaffold_6-View

Populus trichocarpa

Gene id Description Chromosome Strand Multiplicon
PT06G13110No description available.Chr06+View
PT16G08630No description available.Chr16-View
PT10G21810No description available.Chr10+View

Ricinus communis

Gene id Description Chromosome Strand Multiplicon
RC29805G00100No description available.29805+View

Solanum lycopersicum

Gene id Description Chromosome Strand Multiplicon
SL09G007410Calmodulin-binding protein (AHRD V1 **-* C5HYF8_BRARP)%3B contains Interpro domain(s) IPR000048 IQ calmodulin-binding regionch09-View
SL10G084280Calmodulin-binding protein (AHRD V1 *--* C5HYF8_BRARP)%3B contains Interpro domain(s) IPR000048 IQ calmodulin-binding regionch10+View
SL10G086060IQ-domain 10 (Fragment) (AHRD V1 *--- D7L3Y4_ARALY)%3B contains Interpro domain(s) IPR000048 IQ calmodulin-binding regionch10-View

Solanum tuberosum

Gene id Description Chromosome Strand Multiplicon
ST10G024720Calmodulin-binding protein (AHRD V1 *--* C5HYF8_BRARP); contains Interpro domain(s) IPR000048 IQ calmodulin-binding regionchr10-View
ST10G028700Calmodulin-binding protein (AHRD V1 **-* C5HYF8_BRARP); contains Interpro domain(s) IPR000048 IQ calmodulin-binding regionchr10+View
ST09G006980Calmodulin-binding protein (AHRD V1 **-* C5HYF8_BRARP); contains Interpro domain(s) IPR000048 IQ calmodulin-binding regionchr09-View

Theobroma cacao

Gene id Description Chromosome Strand Multiplicon
TC0005G05260No description available.scaffold_5-View

Thellungiella parvula

Gene id Description Chromosome Strand Multiplicon
TP3G08050similar to AT3G09710|IQD1 (IQ-DOMAIN 1)ch3-1-View
TP6G39650similar to AT5G03040|iqd2 (IQ-domain 2)ch6-6+View

Vitis vinifera

Gene id Description Chromosome Strand Multiplicon
VV08G02490name=GSVIVG01025635001;chr8+View

Zea mays

Gene id Description Chromosome Strand Multiplicon
ZM03G27790No description available.3+View
ZM06G03880No description available.6-View


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Gene id
Species
Description
Chromosome
Strand