Anchorpoints

Gene id
AL5G31160
Organism
Arabidopsis lyrata

Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
AL4G32810No description available.scaffold_4+View


Orthologs (inter-species colinear regions)

Arabidopsis thaliana

Gene id Description Chromosome Strand Multiplicon
AT2G44940Integrase-type DNA-binding superfamily protein encodes a member of the DREB subfamily A-4 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 17 members in this subfamily including TINY. Integrase-type DNA-binding superfamily protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: nucleus, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: Integrase-type DNA-binding superfamily protein (TAIR:AT3G60490.1); Has 6573 Blast hits to 6019 proteins in 323 species: Archae - 0; Bacteria - 81; Metazoa - 170; Fungi - 124; Plants - 5956; Viruses - 0; Other Eukaryotes - 242 (source: NCBI BLink).2+View
AT3G60490Integrase-type DNA-binding superfamily protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: nucleus, chloroplast; EXPRESSED IN: leaf apex, hypocotyl, root, flower; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: Integrase-type DNA-binding superfamily protein (TAIR:AT2G44940.1); Has 5687 Blast hits to 5580 proteins in 251 species: Archae - 0; Bacteria - 11; Metazoa - 1; Fungi - 6; Plants - 5663; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink). encodes a member of the DREB subfamily A-4 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 17 members in this subfamily including TINY. Integrase-type DNA-binding superfamily protein3+View

Brassica rapa

Gene id Description Chromosome Strand Multiplicon
BR07G16560No description available.A07+View
BR03G22140No description available.A03+View
BR04G26810No description available.A04+View
BR05G04680No description available.A05+View
BR09G40050No description available.A09+View

Beta vulgaris

Gene id Description Chromosome Strand Multiplicon
BV0G64630No description available.Bvchr1_un.sca002+View

Citrullus lanatus

Gene id Description Chromosome Strand Multiplicon
CL05G00450No description available.Chr5-View
CL10G02460No description available.Chr10+View

Cucumis melo

Gene id Description Chromosome Strand Multiplicon
CM00021G02430No description available.CM3.5_scaffold00021+View
CM00006G00480No description available.CM3.5_scaffold00006-View

Capsella rubella

Gene id Description Chromosome Strand Multiplicon
CRU_004G26580No description available.scaffold_4+View
CRU_005G25820No description available.scaffold_5+View

Citrus sinensis

Gene id Description Chromosome Strand Multiplicon
CS00001G00980No description available.scaffold00001+View
CS00053G00230No description available.scaffold00053+View

Eucalyptus grandis

Gene id Description Chromosome Strand Multiplicon
EG0005G13070No description available.scaffold_5+View

Fragaria vesca

Gene id Description Chromosome Strand Multiplicon
FV7G13790Ethylene-responsive transcription factor ERF034 (similar to)LG7+View

Glycine max

Gene id Description Chromosome Strand Multiplicon
GM05G04920No description available.Gm05-View
GM07G14560No description available.Gm07+View
GM11G03790No description available.Gm11-View
GM03G27050No description available.Gm03+View

Gossypium raimondii

Gene id Description Chromosome Strand Multiplicon
GR08G10770No description available.Chr08-View
GR01G17650No description available.Chr01-View
GR07G08710No description available.Chr07+View
GR03G17510No description available.Chr03-View
GR04G16530No description available.Chr04-View

Manihot esculenta

Gene id Description Chromosome Strand Multiplicon
ME11581G00740No description available.scaffold11581-View
ME08265G04630No description available.scaffold08265+View

Oryza sativa ssp. japonica

Gene id Description Chromosome Strand Multiplicon
OS02G43940AP2 domain containing protein, expressed2+View
OS04G46400AP2 domain containing protein, expressed4+View

Prunus persica

Gene id Description Chromosome Strand Multiplicon
PPE_002G12710No description available.scaffold_2-View

Populus trichocarpa

Gene id Description Chromosome Strand Multiplicon
PT02G14120No description available.Chr02+View
PT14G05570No description available.Chr14+View

Ricinus communis

Gene id Description Chromosome Strand Multiplicon
RC30174G00460No description available.30174+View

Solanum lycopersicum

Gene id Description Chromosome Strand Multiplicon
SL01G090560Ethylene-responsive transcription factor 4 (AHRD V1 *-*- ERF78_ARATH)%3B contains Interpro domain(s) IPR001471 Pathogenesis-related transcriptional factor and ERF%2C DNA-bindingch01+View
SL08G078410Ethylene-responsive transcription factor 1 (AHRD V1 *-*- ERF1_ORYSJ)%3B contains Interpro domain(s) IPR001471 Pathogenesis-related transcriptional factor and ERF%2C DNA-bindingch08+View

Solanum tuberosum

Gene id Description Chromosome Strand Multiplicon
ST01G029740Ethylene-responsive transcription factor 10 (AHRD V1 *-*- ERF77_ARATH); contains Interpro domain(s) IPR001471 Pathogenesis-related transcriptional factor and ERF, DNA-bindingchr01+View

Theobroma cacao

Gene id Description Chromosome Strand Multiplicon
TC0001G38380No description available.scaffold_1-View

Thellungiella parvula

Gene id Description Chromosome Strand Multiplicon
TP4G27020similar to AT2G44940|AP2 domain-containing transcription factor TINY, putativech4-6+View
TP5G02730similar to AT3G60490|AP2 domain-containing transcription factor TINY, putativech5-1-View

Zea mays

Gene id Description Chromosome Strand Multiplicon
ZM09G18060DREB-like protein9+View
ZM02G07750dehydration-responsive element-binding protein 1C2-View


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Description
Chromosome
Strand