Anchorpoints
- Gene id
- AL5G31160
- Organism
- Arabidopsis lyrata
Paralogs (intra-species colinear regions)
Orthologs (inter-species colinear regions)
Arabidopsis thaliana
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
AT2G44940 | Integrase-type DNA-binding superfamily protein encodes a member of the DREB subfamily A-4 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 17 members in this subfamily including TINY. Integrase-type DNA-binding superfamily protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: nucleus, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: Integrase-type DNA-binding superfamily protein (TAIR:AT3G60490.1); Has 6573 Blast hits to 6019 proteins in 323 species: Archae - 0; Bacteria - 81; Metazoa - 170; Fungi - 124; Plants - 5956; Viruses - 0; Other Eukaryotes - 242 (source: NCBI BLink). | 2 | + | View |
AT3G60490 | Integrase-type DNA-binding superfamily protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: nucleus, chloroplast; EXPRESSED IN: leaf apex, hypocotyl, root, flower; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: Integrase-type DNA-binding superfamily protein (TAIR:AT2G44940.1); Has 5687 Blast hits to 5580 proteins in 251 species: Archae - 0; Bacteria - 11; Metazoa - 1; Fungi - 6; Plants - 5663; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink). encodes a member of the DREB subfamily A-4 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 17 members in this subfamily including TINY. Integrase-type DNA-binding superfamily protein | 3 | + | View |
Brassica rapa
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
BR07G16560 | No description available. | A07 | + | View |
BR03G22140 | No description available. | A03 | + | View |
BR04G26810 | No description available. | A04 | + | View |
BR05G04680 | No description available. | A05 | + | View |
BR09G40050 | No description available. | A09 | + | View |
Beta vulgaris
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
BV0G64630 | No description available. | Bvchr1_un.sca002 | + | View |
Citrullus lanatus
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CL05G00450 | No description available. | Chr5 | - | View |
CL10G02460 | No description available. | Chr10 | + | View |
Cucumis melo
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CM00021G02430 | No description available. | CM3.5_scaffold00021 | + | View |
CM00006G00480 | No description available. | CM3.5_scaffold00006 | - | View |
Capsella rubella
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CRU_004G26580 | No description available. | scaffold_4 | + | View |
CRU_005G25820 | No description available. | scaffold_5 | + | View |
Citrus sinensis
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CS00001G00980 | No description available. | scaffold00001 | + | View |
CS00053G00230 | No description available. | scaffold00053 | + | View |
Eucalyptus grandis
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
EG0005G13070 | No description available. | scaffold_5 | + | View |
Fragaria vesca
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
FV7G13790 | Ethylene-responsive transcription factor ERF034 (similar to) | LG7 | + | View |
Glycine max
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
GM05G04920 | No description available. | Gm05 | - | View |
GM07G14560 | No description available. | Gm07 | + | View |
GM11G03790 | No description available. | Gm11 | - | View |
GM03G27050 | No description available. | Gm03 | + | View |
Gossypium raimondii
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
GR08G10770 | No description available. | Chr08 | - | View |
GR01G17650 | No description available. | Chr01 | - | View |
GR07G08710 | No description available. | Chr07 | + | View |
GR03G17510 | No description available. | Chr03 | - | View |
GR04G16530 | No description available. | Chr04 | - | View |
Manihot esculenta
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
ME11581G00740 | No description available. | scaffold11581 | - | View |
ME08265G04630 | No description available. | scaffold08265 | + | View |
Oryza sativa ssp. japonica
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
OS02G43940 | AP2 domain containing protein, expressed | 2 | + | View |
OS04G46400 | AP2 domain containing protein, expressed | 4 | + | View |
Prunus persica
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
PPE_002G12710 | No description available. | scaffold_2 | - | View |
Populus trichocarpa
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
PT02G14120 | No description available. | Chr02 | + | View |
PT14G05570 | No description available. | Chr14 | + | View |
Ricinus communis
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
RC30174G00460 | No description available. | 30174 | + | View |
Solanum lycopersicum
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
SL01G090560 | Ethylene-responsive transcription factor 4 (AHRD V1 *-*- ERF78_ARATH)%3B contains Interpro domain(s) IPR001471 Pathogenesis-related transcriptional factor and ERF%2C DNA-binding | ch01 | + | View |
SL08G078410 | Ethylene-responsive transcription factor 1 (AHRD V1 *-*- ERF1_ORYSJ)%3B contains Interpro domain(s) IPR001471 Pathogenesis-related transcriptional factor and ERF%2C DNA-binding | ch08 | + | View |
Solanum tuberosum
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
ST01G029740 | Ethylene-responsive transcription factor 10 (AHRD V1 *-*- ERF77_ARATH); contains Interpro domain(s) IPR001471 Pathogenesis-related transcriptional factor and ERF, DNA-binding | chr01 | + | View |
Theobroma cacao
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
TC0001G38380 | No description available. | scaffold_1 | - | View |
Thellungiella parvula
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
TP4G27020 | similar to AT2G44940|AP2 domain-containing transcription factor TINY, putative | ch4-6 | + | View |
TP5G02730 | similar to AT3G60490|AP2 domain-containing transcription factor TINY, putative | ch5-1 | - | View |
Zea mays
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
ZM09G18060 | DREB-like protein | 9 | + | View |
ZM02G07750 | dehydration-responsive element-binding protein 1C | 2 | - | View |