Anchorpoints

Gene id
AL5G28090
Organism
Arabidopsis lyrata

Paralogs (intra-species colinear regions)

No paralogous anchorpoints available


Orthologs (inter-species colinear regions)

Arabidopsis thaliana

Gene id Description Chromosome Strand Multiplicon
AT5G43410encodes a member of the ERF (ethylene response factor) subfamily B-3 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 18 members in this subfamily including ATERF-1, ATERF-2, AND ATERF-5. Integrase-type DNA-binding superfamily protein Integrase-type DNA-binding superfamily protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: nucleus; CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: Ethylene-responsive element binding factor 14 (TAIR:AT1G04370.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).5-View
AT3G57600Integrase-type DNA-binding superfamily protein Integrase-type DNA-binding superfamily protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: nucleus; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: Integrase-type DNA-binding superfamily protein (TAIR:AT5G18450.1); Has 5751 Blast hits to 5635 proteins in 247 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0; Plants - 5730; Viruses - 2; Other Eukaryotes - 17 (source: NCBI BLink). encodes a member of the DREB subfamily A-2 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are eight members in this subfamily including DREB2A AND DREB2B that are involved in response to drought.3+View

Brassica rapa

Gene id Description Chromosome Strand Multiplicon
BR04G02720No description available.A04-View
BR09G38090No description available.A09+View

Beta vulgaris

Gene id Description Chromosome Strand Multiplicon
BV3G16270No description available.Bvchr3.sca009-View

Citrullus lanatus

Gene id Description Chromosome Strand Multiplicon
CL10G15170No description available.Chr10+View

Cucumis melo

Gene id Description Chromosome Strand Multiplicon
CM00011G06050No description available.CM3.5_scaffold00011-View

Carica papaya

Gene id Description Chromosome Strand Multiplicon
CP00092G00160No description available.supercontig_92-View

Capsella rubella

Gene id Description Chromosome Strand Multiplicon
CRU_005G23090No description available.scaffold_5+View

Eucalyptus grandis

Gene id Description Chromosome Strand Multiplicon
EG0001G20060No description available.scaffold_1+View

Fragaria vesca

Gene id Description Chromosome Strand Multiplicon
FV7G27980Dehydration-responsive element-binding protein 2F (Protein DREB2F) (probable)LG7-View

Glycine max

Gene id Description Chromosome Strand Multiplicon
GM19G32380No description available.Gm19+View
GM03G29530No description available.Gm03+View
GM02G31350No description available.Gm02-View

Gossypium raimondii

Gene id Description Chromosome Strand Multiplicon
GR07G35940No description available.Chr07-View

Manihot esculenta

Gene id Description Chromosome Strand Multiplicon
ME07046G00090No description available.scaffold07046-View
ME04526G00120No description available.scaffold04526-View

Medicago truncatula

Gene id Description Chromosome Strand Multiplicon
MT7G092190dehydration-responsive element-binding proteinchr7+View

Prunus persica

Gene id Description Chromosome Strand Multiplicon
PPE_007G08040No description available.scaffold_7+View

Populus trichocarpa

Gene id Description Chromosome Strand Multiplicon
PT16G05320No description available.Chr16-View
PT06G05450No description available.Chr06+View

Ricinus communis

Gene id Description Chromosome Strand Multiplicon
RC27810G00100No description available.27810+View

Solanum lycopersicum

Gene id Description Chromosome Strand Multiplicon
SL10G080310Ethylene-responsive transcription factor 10 (AHRD V1 ***- ERF77_ARATH)%3B contains Interpro domain(s) IPR001471 Pathogenesis-related transcriptional factor and ERF%2C DNA-bindingch10+View

Solanum tuberosum

Gene id Description Chromosome Strand Multiplicon
ST10G022030Ethylene-responsive transcription factor 10 (AHRD V1 ***- ERF77_ARATH); contains Interpro domain(s) IPR001471 Pathogenesis-related transcriptional factor and ERF, DNA-bindingchr10+View

Theobroma cacao

Gene id Description Chromosome Strand Multiplicon
TC0005G16310No description available.scaffold_5+View

Thellungiella parvula

Gene id Description Chromosome Strand Multiplicon
TP5G05010similar to AT3G57600|AP2 domain-containing transcription factor, putativech5-1-View


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Gene id
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Description
Chromosome
Strand