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Functional clusters
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BLAST
WorkbenchAnchorpoints
- Gene id
- AL5G21870
- Organism
- Arabidopsis lyrata
Paralogs (intra-species colinear regions)
No paralogous anchorpoints available
Orthologs (inter-species colinear regions)
Arabidopsis thaliana
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| AT3G52120 | SWAP (Suppressor-of-White-APricot)/surp domain-containing protein / D111/G-patch domain-containing protein SWAP (Suppressor-of-White-APricot)/surp domain-containing protein / D111/G-patch domain-containing protein; FUNCTIONS IN: RNA binding, nucleic acid binding; INVOLVED IN: RNA processing; LOCATED IN: intracellular; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: SWAP/Surp (InterPro:IPR000061), D111/G-patch (InterPro:IPR000467); Has 1460 Blast hits to 1340 proteins in 171 species: Archae - 0; Bacteria - 0; Metazoa - 1005; Fungi - 124; Plants - 274; Viruses - 0; Other Eukaryotes - 57 (source: NCBI BLink). | 3 | + | View |
Brassica rapa
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| BR09G33690 | No description available. | A09 | + | View |
| BR04G05970 | No description available. | A04 | - | View |
Citrullus lanatus
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| CL09G03920 | No description available. | Chr9 | + | View |
Capsella rubella
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| CRU_005G17330 | No description available. | scaffold_5 | + | View |
Eucalyptus grandis
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| EG0010G11130 | No description available. | scaffold_10 | - | View |
Gossypium raimondii
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| GR04G17410 | No description available. | Chr04 | + | View |
Malus domestica
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| MD07G000470 | No description available. | 7 | - | View |
Manihot esculenta
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| ME11106G00350 | No description available. | scaffold11106 | - | View |
Solanum lycopersicum
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| SL01G086890 | Splicing factor 4-like protein (Fragment) (AHRD V1 *--- A6ML01_CALJA)%3B contains Interpro domain(s) IPR000467 D111/G-patch | ch01 | - | View |
Thellungiella parvula
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| TP5G10160 | similar to AT3G52120|SWAP (Suppressor-of-White-APricot)/surp domain-containing protein / D111/G-patch domain-containing protein | ch5-1 | - | View |