Anchorpoints

Gene id
AL5G16410
Organism
Arabidopsis lyrata

Paralogs (intra-species colinear regions)

No paralogous anchorpoints available


Orthologs (inter-species colinear regions)

Arabidopsis thaliana

Gene id Description Chromosome Strand Multiplicon
AT3G47620'TEOSINTE BRANCHED, cycloidea and PCF (TCP) 14' (TCP14); CONTAINS InterPro DOMAIN/s: Transcription factor, TCP (InterPro:IPR005333), Transcription factor TCP subgroup (InterPro:IPR017887); BEST Arabidopsis thaliana protein match is: TCP family transcription factor (TAIR:AT1G58100.1); Has 1158 Blast hits to 1082 proteins in 149 species: Archae - 2; Bacteria - 69; Metazoa - 397; Fungi - 50; Plants - 507; Viruses - 0; Other Eukaryotes - 133 (source: NCBI BLink). TEOSINTE BRANCHED, cycloidea and PCF (TCP) 14 Encodes a transcription factor AtTCP14 that regulates seed germination. AtTCP14 shows elevated expression level just prior to germination. AtTCP14 is predominantly expressed in the vascular tissue of the embryo, and affects gene expression in radicles in a non-cell-autonomous manner.3+View

Amborella trichopoda

Gene id Description Chromosome Strand Multiplicon
ATR_00010G04040No description available.scaffold00010-View

Brassica rapa

Gene id Description Chromosome Strand Multiplicon
BR06G17690No description available.A06-View

Beta vulgaris

Gene id Description Chromosome Strand Multiplicon
BV6G02940No description available.Bvchr6.sca028+View

Citrullus lanatus

Gene id Description Chromosome Strand Multiplicon
CL06G16810No description available.Chr6+View

Cucumis melo

Gene id Description Chromosome Strand Multiplicon
CM00030G00900No description available.CM3.5_scaffold00030-View
CM00001G00610No description available.CM3.5_scaffold00001-View

Capsella rubella

Gene id Description Chromosome Strand Multiplicon
CRU_005G12890No description available.scaffold_5+View

Citrus sinensis

Gene id Description Chromosome Strand Multiplicon
CS00009G00560No description available.scaffold00009-View
CS00003G04150No description available.scaffold00003-View

Eucalyptus grandis

Gene id Description Chromosome Strand Multiplicon
EG0002G04020No description available.scaffold_2-View

Fragaria vesca

Gene id Description Chromosome Strand Multiplicon
FV0G05690Transcription factor TCP15 (probable)scf0513158+View
FV5G13540Transcription factor TCP14 (probable)LG5+View

Glycine max

Gene id Description Chromosome Strand Multiplicon
GM05G01131No description available.Gm05+View
GM17G10760No description available.Gm17-View
GM06G20660No description available.Gm06-View

Gossypium raimondii

Gene id Description Chromosome Strand Multiplicon
GR08G19240No description available.Chr08-View
GR07G03680No description available.Chr07-View

Malus domestica

Gene id Description Chromosome Strand Multiplicon
MD14G019150No description available.14-View
MD06G015650No description available.6-View
MD16G003950No description available.16+View
MD13G004870No description available.13+View

Manihot esculenta

Gene id Description Chromosome Strand Multiplicon
ME08359G02430No description available.scaffold08359+View
ME12794G02020No description available.scaffold12794-View
ME11495G00390No description available.scaffold11495+View

Medicago truncatula

Gene id Description Chromosome Strand Multiplicon
MT4G108370TCP family transcription factorchr4-View

Prunus persica

Gene id Description Chromosome Strand Multiplicon
PPE_005G19610No description available.scaffold_5-View

Ricinus communis

Gene id Description Chromosome Strand Multiplicon
RC30147G07860No description available.30147-View

Solanum lycopersicum

Gene id Description Chromosome Strand Multiplicon
SL03G116320TCP family transcription factor (AHRD V1 *-*- A6MCZ2_9ORYZ)%3B contains Interpro domain(s) IPR005333 Transcription factor%2C TCPch03+View
SL06G070900TCP family transcription factor (AHRD V1 *-** A6MCZ2_9ORYZ)%3B contains Interpro domain(s) IPR005333 Transcription factor%2C TCPch06+View

Solanum tuberosum

Gene id Description Chromosome Strand Multiplicon
ST06G026900TCP family transcription factor (AHRD V1 *-** A6MCZ2_9ORYZ); contains Interpro domain(s) IPR005333 Transcription factor, TCPchr06+View
ST03G029780TCP family transcription factor (AHRD V1 *-*- A6MCZ2_9ORYZ); contains Interpro domain(s) IPR005333 Transcription factor, TCPchr03+View

Theobroma cacao

Gene id Description Chromosome Strand Multiplicon
TC0003G08710No description available.scaffold_3-View

Thellungiella parvula

Gene id Description Chromosome Strand Multiplicon
TP5G14290similar to AT3G47620|AtTCP14 (TEOSINTE BRANCHED1, CYCLOIDEA and PCF (TCP) 14)ch5-1-View

Vitis vinifera

Gene id Description Chromosome Strand Multiplicon
VV17G03850name=GSVIVG01008023001;chr17-View


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Gene id
Species
Description
Chromosome
Strand