PLAZA 3.0 Dicots : colinear gene pairs

Anchorpoints

Gene id: AL5G14580
Organism: Arabidopsis lyrata

Paralogs (intra-species colinear regions)

No paralogous anchorpoints available

Orthologs (inter-species colinear regions)

Arabidopsis thaliana

Gene id	Description	Chromosome	Strand	Multiplicon
AT3G46230	heat shock protein 17.4 heat shock protein 17.4 (HSP17.4); INVOLVED IN: response to heat; LOCATED IN: cellular_component unknown; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: M germinated pollen stage, LP.04 four leaves visible, 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Heat shock protein Hsp20 (InterPro:IPR002068), HSP20-like chaperone (InterPro:IPR008978); BEST Arabidopsis thaliana protein match is: HSP20-like chaperones superfamily protein (TAIR:AT1G53540.1); Has 7056 Blast hits to 7055 proteins in 1590 species: Archae - 177; Bacteria - 4281; Metazoa - 88; Fungi - 291; Plants - 1609; Viruses - 0; Other Eukaryotes - 610 (source: NCBI BLink). member of the class I small heat-shock protein (sHSP) family, which accounts for the majority of sHSPs in maturing seeds	3	-	View
AT5G59720	heat shock protein 18.2 (HSP18.2); CONTAINS InterPro DOMAIN/s: Heat shock protein Hsp20 (InterPro:IPR002068), HSP20-like chaperone (InterPro:IPR008978); BEST Arabidopsis thaliana protein match is: HSP20-like chaperones superfamily protein (TAIR:AT1G53540.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). heat shock protein 18.2 encodes a low molecular weight heat shock protein that contains the heat shock element in the promoter region. Expression is induced in response to heat shock.	5	+	View

Brassica rapa

Gene id	Description	Chromosome	Strand	Multiplicon
BR06G18580	No description available.	A06	+	View
BR02G12080	No description available.	A02	-	View
BR10G12440	No description available.	A10	+	View
BR03G10330	No description available.	A03	-	View

Capsella rubella

Gene id	Description	Chromosome	Strand	Multiplicon
CRU_005G11350	No description available.	scaffold_5	-	View

Eucalyptus grandis

Gene id	Description	Chromosome	Strand	Multiplicon
EG0002G19030	No description available.	scaffold_2	+	View

Gossypium raimondii

Gene id	Description	Chromosome	Strand	Multiplicon
GR01G10670	No description available.	Chr01	-	View
GR03G13810	No description available.	Chr03	+	View

Thellungiella parvula

Gene id	Description	Chromosome	Strand	Multiplicon
TP5G15400	similar to AT3G46230\|ATHSP17.4	ch5-1	+	View