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BLAST
WorkbenchAnchorpoints
- Gene id
- AL5G02590
- Organism
- Arabidopsis lyrata
Paralogs (intra-species colinear regions)
Orthologs (inter-species colinear regions)
Arabidopsis thaliana
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| AT2G03090 | member of Alpha-Expansin Gene Family. Naming convention from the Expansin Working Group (Kende et al, 2004. Plant Mol Bio). Involved in the formation of nematode-induced syncytia in roots of Arabidopsis thaliana. expansin A15 expansin A15 (EXPA15); INVOLVED IN: plant-type cell wall modification involved in multidimensional cell growth, syncytium formation, unidimensional cell growth, plant-type cell wall loosening; LOCATED IN: endomembrane system, extracellular region; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pollen allergen, N-terminal (InterPro:IPR014734), Rare lipoprotein A (InterPro:IPR005132), Pollen allergen/expansin, C-terminal (InterPro:IPR007117), Barwin-related endoglucanase (InterPro:IPR009009), Expansin (InterPro:IPR002963), Expansin/Lol pI (InterPro:IPR007118), Expansin 45, endoglucanase-like (InterPro:IPR007112); BEST Arabidopsis thaliana protein match is: expansin A1 (TAIR:AT1G69530.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). | 2 | - | View |
Amborella trichopoda
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| ATR_00010G05010 | No description available. | scaffold00010 | - | View |
Brassica rapa
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| BR07G26310 | No description available. | A07 | + | View |
| BR02G30420 | No description available. | A02 | + | View |
| BR06G34660 | No description available. | A06 | + | View |
Beta vulgaris
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| BV6G02370 | No description available. | Bvchr6.sca028 | + | View |
Citrullus lanatus
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| CL05G25140 | No description available. | Chr5 | + | View |
| CL09G18620 | No description available. | Chr9 | + | View |
Cucumis melo
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| CM00001G00820 | No description available. | CM3.5_scaffold00001 | - | View |
| CM00016G04340 | No description available. | CM3.5_scaffold00016 | - | View |
Capsella rubella
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| CRU_005G01780 | No description available. | scaffold_5 | - | View |
Citrus sinensis
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| CS00003G04480 | No description available. | scaffold00003 | - | View |
Eucalyptus grandis
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| EG0007G19230 | No description available. | scaffold_7 | + | View |
| EG0002G26460 | No description available. | scaffold_2 | + | View |
Fragaria vesca
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| FV0G05340 | Expansin-A1 (AtEXPA1), Precursor (putative) | scf0513158 | + | View |
| FV5G13090 | Expansin-A1 (AtEXPA1), Precursor (putative) | LG5 | + | View |
Glycine max
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| GM20G04490 | No description available. | Gm20 | + | View |
| GM18G49570 | No description available. | Gm18 | - | View |
| GM01G06030 | No description available. | Gm01 | - | View |
| GM04G33350 | No description available. | Gm04 | + | View |
| GM02G12140 | No description available. | Gm02 | - | View |
Gossypium raimondii
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| GR13G08690 | No description available. | Chr13 | - | View |
| GR05G14220 | No description available. | Chr05 | - | View |
Malus domestica
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| MD13G004560 | No description available. | 13 | + | View |
Manihot esculenta
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| ME03079G00050 | No description available. | scaffold03079 | - | View |
Medicago truncatula
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| MT5G041700 | expansin A10 | chr5 | - | View |
| MT4G081950 | expansin-A1-like protein | chr4 | - | View |
Prunus persica
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| PPE_001G28820 | No description available. | scaffold_1 | - | View |
Populus trichocarpa
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| PT08G08830 | No description available. | Chr08 | - | View |
| PT17G08530 | No description available. | Chr17 | - | View |
| PT10G16720 | No description available. | Chr10 | + | View |
Solanum tuberosum
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| ST03G029370 | Expansin (AHRD V1 ***- Q9FVG9_SOLLC); contains Interpro domain(s) IPR002963 Expansin | chr03 | + | View |
Thellungiella parvula
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| TP2G14080 | similar to AT2G03090|ATEXPA15 (ARABIDOPSIS THALIANA EXPANSIN A15) | ch2-4 | - | View |
Vitis vinifera
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| VV17G03550 | name=GSVIVG01007987001; | chr17 | - | View |