Anchorpoints
- Gene id
- AL4G30730
- Organism
- Arabidopsis lyrata
Paralogs (intra-species colinear regions)
No paralogous anchorpoints available
Orthologs (inter-species colinear regions)
Arabidopsis thaliana
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
AT3G59440 | Calcium-binding EF-hand family protein; FUNCTIONS IN: calcium ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: EF-Hand 1, calcium-binding site (InterPro:IPR018247), EF-HAND 2 (InterPro:IPR018249), EF-hand-like domain (InterPro:IPR011992), Calcium-binding EF-hand (InterPro:IPR002048), EF-hand (InterPro:IPR018248); BEST Arabidopsis thaliana protein match is: Calcium-binding EF-hand family protein (TAIR:AT2G43290.1); Has 23710 Blast hits to 16970 proteins in 1546 species: Archae - 3; Bacteria - 191; Metazoa - 9601; Fungi - 5599; Plants - 4898; Viruses - 2; Other Eukaryotes - 3416 (source: NCBI BLink). Calcium-binding EF-hand family protein | 3 | + | View |
AT2G43290 | Encodes calmodulin-like MSS3. Calcium-binding EF-hand family protein multicopy suppressors of snf4 deficiency in yeast 3 (MSS3); FUNCTIONS IN: calcium ion binding; INVOLVED IN: biological_process unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: EF-Hand 1, calcium-binding site (InterPro:IPR018247), EF-HAND 2 (InterPro:IPR018249), EF-hand-like domain (InterPro:IPR011992), Calcium-binding EF-hand (InterPro:IPR002048), EF-hand (InterPro:IPR018248); BEST Arabidopsis thaliana protein match is: Calcium-binding EF-hand family protein (TAIR:AT3G59440.1); Has 26796 Blast hits to 17896 proteins in 1618 species: Archae - 9; Bacteria - 273; Metazoa - 11544; Fungi - 5684; Plants - 5303; Viruses - 2; Other Eukaryotes - 3981 (source: NCBI BLink). | 2 | - | View |
Brassica rapa
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
BR04G25850 | No description available. | A04 | - | View |
BR07G16170 | No description available. | A07 | + | View |
BR09G39170 | No description available. | A09 | + | View |
BR03G21470 | No description available. | A03 | - | View |
Carica papaya
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CP00009G02760 | No description available. | supercontig_9 | + | View |
Capsella rubella
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CRU_005G24770 | No description available. | scaffold_5 | + | View |
CRU_004G24820 | No description available. | scaffold_4 | - | View |
Eucalyptus grandis
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
EG0008G03290 | No description available. | scaffold_8 | - | View |
Glycine max
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
GM02G15000 | No description available. | Gm02 | + | View |
Gossypium raimondii
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
GR11G14220 | No description available. | Chr11 | - | View |
GR05G12860 | No description available. | Chr05 | - | View |
GR05G01690 | No description available. | Chr05 | - | View |
GR06G22840 | No description available. | Chr06 | + | View |
Malus domestica
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
MD04G000290 | No description available. | 4 | + | View |
Medicago truncatula
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
MT4G067270 | EF hand calcium-binding family protein | chr4 | + | View |
MT2G098890 | EF hand calcium-binding family protein | chr2 | - | View |
Populus trichocarpa
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
PT07G12860 | No description available. | Chr07 | + | View |
PT17G02970 | No description available. | Chr17 | - | View |
PT02G07730 | No description available. | Chr02 | - | View |
Solanum tuberosum
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
ST06G027730 | Calmodulin-like protein (AHRD V1 ***- Q6RZU7_MUSAC); contains Interpro domain(s) IPR011992 EF-Hand type | chr06 | + | View |
Thellungiella parvula
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
TP4G25400 | similar to AT2G43290|MSS3 (multicopy suppressors of snf4 deficiency in yeast 3) | ch4-6 | - | View |
TP5G03700 | similar to AT3G59440|calcium-binding protein, putative | ch5-1 | - | View |