Anchorpoints

Gene id
AL4G30730
Organism
Arabidopsis lyrata

Paralogs (intra-species colinear regions)

No paralogous anchorpoints available


Orthologs (inter-species colinear regions)

Arabidopsis thaliana

Gene id Description Chromosome Strand Multiplicon
AT3G59440Calcium-binding EF-hand family protein; FUNCTIONS IN: calcium ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: EF-Hand 1, calcium-binding site (InterPro:IPR018247), EF-HAND 2 (InterPro:IPR018249), EF-hand-like domain (InterPro:IPR011992), Calcium-binding EF-hand (InterPro:IPR002048), EF-hand (InterPro:IPR018248); BEST Arabidopsis thaliana protein match is: Calcium-binding EF-hand family protein (TAIR:AT2G43290.1); Has 23710 Blast hits to 16970 proteins in 1546 species: Archae - 3; Bacteria - 191; Metazoa - 9601; Fungi - 5599; Plants - 4898; Viruses - 2; Other Eukaryotes - 3416 (source: NCBI BLink). Calcium-binding EF-hand family protein3+View
AT2G43290Encodes calmodulin-like MSS3. Calcium-binding EF-hand family protein multicopy suppressors of snf4 deficiency in yeast 3 (MSS3); FUNCTIONS IN: calcium ion binding; INVOLVED IN: biological_process unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: EF-Hand 1, calcium-binding site (InterPro:IPR018247), EF-HAND 2 (InterPro:IPR018249), EF-hand-like domain (InterPro:IPR011992), Calcium-binding EF-hand (InterPro:IPR002048), EF-hand (InterPro:IPR018248); BEST Arabidopsis thaliana protein match is: Calcium-binding EF-hand family protein (TAIR:AT3G59440.1); Has 26796 Blast hits to 17896 proteins in 1618 species: Archae - 9; Bacteria - 273; Metazoa - 11544; Fungi - 5684; Plants - 5303; Viruses - 2; Other Eukaryotes - 3981 (source: NCBI BLink).2-View

Brassica rapa

Gene id Description Chromosome Strand Multiplicon
BR04G25850No description available.A04-View
BR07G16170No description available.A07+View
BR09G39170No description available.A09+View
BR03G21470No description available.A03-View

Carica papaya

Gene id Description Chromosome Strand Multiplicon
CP00009G02760No description available.supercontig_9+View

Capsella rubella

Gene id Description Chromosome Strand Multiplicon
CRU_005G24770No description available.scaffold_5+View
CRU_004G24820No description available.scaffold_4-View

Eucalyptus grandis

Gene id Description Chromosome Strand Multiplicon
EG0008G03290No description available.scaffold_8-View

Glycine max

Gene id Description Chromosome Strand Multiplicon
GM02G15000No description available.Gm02+View

Gossypium raimondii

Gene id Description Chromosome Strand Multiplicon
GR11G14220No description available.Chr11-View
GR05G12860No description available.Chr05-View
GR05G01690No description available.Chr05-View
GR06G22840No description available.Chr06+View

Malus domestica

Gene id Description Chromosome Strand Multiplicon
MD04G000290No description available.4+View

Medicago truncatula

Gene id Description Chromosome Strand Multiplicon
MT4G067270EF hand calcium-binding family proteinchr4+View
MT2G098890EF hand calcium-binding family proteinchr2-View

Populus trichocarpa

Gene id Description Chromosome Strand Multiplicon
PT07G12860No description available.Chr07+View
PT17G02970No description available.Chr17-View
PT02G07730No description available.Chr02-View

Solanum tuberosum

Gene id Description Chromosome Strand Multiplicon
ST06G027730Calmodulin-like protein (AHRD V1 ***- Q6RZU7_MUSAC); contains Interpro domain(s) IPR011992 EF-Hand typechr06+View

Thellungiella parvula

Gene id Description Chromosome Strand Multiplicon
TP4G25400similar to AT2G43290|MSS3 (multicopy suppressors of snf4 deficiency in yeast 3)ch4-6-View
TP5G03700similar to AT3G59440|calcium-binding protein, putativech5-1-View


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Gene id
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Description
Chromosome
Strand