Expansion plot
Gene family finder
Ks-graphs
Skyline plot
Synteny plot
WGDotplot
Functional clusters
WGMapping
BLAST
WorkbenchAnchorpoints
- Gene id
- AL4G23460
- Organism
- Arabidopsis lyrata
Paralogs (intra-species colinear regions)
No paralogous anchorpoints available
Orthologs (inter-species colinear regions)
Arabidopsis thaliana
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| AT2G37640 | EXP3; INVOLVED IN: in 6 processes; LOCATED IN: endomembrane system, extracellular region; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Barwin-related endoglucanase (InterPro:IPR009009), Pollen allergen, N-terminal (InterPro:IPR014734), Expansin (InterPro:IPR002963), Rare lipoprotein A (InterPro:IPR005132), Expansin/Lol pI (InterPro:IPR007118), Expansin 45, endoglucanase-like (InterPro:IPR007112), Pollen allergen/expansin, C-terminal (InterPro:IPR007117); BEST Arabidopsis thaliana protein match is: expansin A4 (TAIR:AT2G39700.1); Has 2147 Blast hits to 2144 proteins in 153 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 34; Plants - 2079; Viruses - 0; Other Eukaryotes - 32 (source: NCBI BLink). Barwin-like endoglucanases superfamily protein member of Alpha-Expansin Gene Family. Naming convention from the Expansin Working Group (Kende et al, 2004. Plant Mol Bio). Involved in the formation of nematode-induced syncytia in roots of Arabidopsis thaliana. | 2 | - | View |
Brassica rapa
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| BR05G07640 | No description available. | A05 | + | View |
| BR04G16930 | No description available. | A04 | - | View |
Citrullus lanatus
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| CL04G08020 | No description available. | Chr4 | + | View |
Cucumis melo
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| CM00002G00700 | No description available. | CM3.5_scaffold00002 | - | View |
Carica papaya
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| CP00019G00660 | No description available. | supercontig_19 | + | View |
Capsella rubella
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| CRU_004G18970 | No description available. | scaffold_4 | - | View |
Eucalyptus grandis
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| EG0001G10310 | No description available. | scaffold_1 | - | View |
| EG0010G01050 | No description available. | scaffold_10 | + | View |
Fragaria vesca
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| FV7G31080 | Expansin-A8 (AtEXPA8), Precursor (putative) | LG7 | - | View |
Glycine max
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| GM18G39850 | No description available. | Gm18 | - | View |
| GM11G14800 | No description available. | Gm11 | + | View |
| GM12G06730 | No description available. | Gm12 | + | View |
| GM13G41160 | No description available. | Gm13 | - | View |
Gossypium raimondii
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| GR06G17240 | No description available. | Chr06 | + | View |
| GR03G13100 | No description available. | Chr03 | + | View |
Manihot esculenta
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| ME08265G02170 | No description available. | scaffold08265 | - | View |
Medicago truncatula
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| MT7G061720 | expansin-A1-like protein | chr7 | - | View |
Prunus persica
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| PPE_006G26410 | No description available. | scaffold_6 | - | View |
Populus trichocarpa
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| PT06G08610 | No description available. | Chr06 | - | View |
Solanum lycopersicum
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| SL10G086520 | Expansin-1 (AHRD V1 ***- Q6RX69_PETHY)%3B contains Interpro domain(s) IPR002963 Expansin | ch10 | - | View |
| SL06G076220 | Expansin-1 (AHRD V1 ***- Q6RX69_PETHY)%3B contains Interpro domain(s) IPR002963 Expansin | ch06 | - | View |
Solanum tuberosum
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| ST10G028230 | Expansin (AHRD V1 ***- Q9ZP32_SOLLC); contains Interpro domain(s) IPR002963 Expansin | chr10 | + | View |
| ST09G009120 | Expansin (AHRD V1 ***- Q9ZP32_SOLLC); contains Interpro domain(s) IPR002963 Expansin | chr09 | + | View |
Theobroma cacao
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| TC0005G03690 | No description available. | scaffold_5 | + | View |
Thellungiella parvula
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| TP4G20000 | similar to AT2G37640|EXP3 | ch4-6 | - | View |
| TP4G11760 | similar to AT2G28950|ATEXPA6 (ARABIDOPSIS THALIANA EXPANSIN A6) | ch4-6 | - | View |
Vitis vinifera
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| VV08G14490 | name=GSVIVG01034162001; | chr8 | - | View |