Anchorpoints

Gene id
AL4G03010
Organism
Arabidopsis lyrata

Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
AL7G03490No description available.scaffold_7+View


Orthologs (inter-species colinear regions)

Arabidopsis thaliana

Gene id Description Chromosome Strand Multiplicon
AT4G36900related to AP2 10 (RAP2.10); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: DREB and EAR motif protein 3 (TAIR:AT2G23340.1); Has 5719 Blast hits to 5612 proteins in 252 species: Archae - 0; Bacteria - 2; Metazoa - 4; Fungi - 0; Plants - 5703; Viruses - 0; Other Eukaryotes - 10 (source: NCBI BLink). encodes a member of the DREB subfamily A-5 of ERF/AP2 transcription factor family (RAP2.10). The protein contains one AP2 domain. There are 16 members in this subfamily including RAP2.9 and RAP2.1. related to AP2 104+View
AT2G23340DREB and EAR motif protein 3 DREB and EAR motif protein 3 (DEAR3); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: related to AP2 10 (TAIR:AT4G36900.1); Has 5516 Blast hits to 5457 proteins in 238 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 5509; Viruses - 0; Other Eukaryotes - 7 (source: NCBI BLink). encodes a member of the DREB subfamily A-5 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 16 members in this subfamily including RAP2.1, RAP2.9 and RAP2.10.2+View
AT5G67190DREB and EAR motif protein 2 encodes a member of the DREB subfamily A-5 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 16 members in this subfamily including RAP2.1, RAP2.9 and RAP2.10. DREB and EAR motif protein 2 (DEAR2); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: nucleus; EXPRESSED IN: sepal, male gametophyte, carpel; EXPRESSED DURING: 4 anthesis; CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: cooperatively regulated by ethylene and jasmonate 1 (TAIR:AT3G50260.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).5-View

Brassica rapa

Gene id Description Chromosome Strand Multiplicon
BR03G55740No description available.A03-View
BR01G01580No description available.A01+View
BR04G13190No description available.A04+View

Beta vulgaris

Gene id Description Chromosome Strand Multiplicon
BV6G22620No description available.Bvchr6.sca001-View

Citrullus lanatus

Gene id Description Chromosome Strand Multiplicon
CL01G17210No description available.Chr1-View

Cucumis melo

Gene id Description Chromosome Strand Multiplicon
CM00007G06010No description available.CM3.5_scaffold00007-View

Capsella rubella

Gene id Description Chromosome Strand Multiplicon
CRU_004G02450No description available.scaffold_4+View
CRU_007G02860No description available.scaffold_7+View

Citrus sinensis

Gene id Description Chromosome Strand Multiplicon
CS00006G01800No description available.scaffold00006+View

Eucalyptus grandis

Gene id Description Chromosome Strand Multiplicon
EG0006G01670No description available.scaffold_6+View

Glycine max

Gene id Description Chromosome Strand Multiplicon
GM11G05700No description available.Gm11+View
GM01G39540No description available.Gm01-View
GM17G18580No description available.Gm17+View
GM04G04355No description available.Gm04-View
GM06G04490No description available.Gm06-View

Gossypium raimondii

Gene id Description Chromosome Strand Multiplicon
GR10G02190No description available.Chr10+View
GR09G21430No description available.Chr09-View
GR03G02610No description available.Chr03-View
GR08G07790No description available.Chr08-View

Malus domestica

Gene id Description Chromosome Strand Multiplicon
MD02G015770No description available.2-View

Medicago truncatula

Gene id Description Chromosome Strand Multiplicon
MT5G016750ethylene response factorchr5+View
MT3G102100ethylene response factorchr3-View

Prunus persica

Gene id Description Chromosome Strand Multiplicon
PPE_006G24060No description available.scaffold_6+View

Populus trichocarpa

Gene id Description Chromosome Strand Multiplicon
PT14G02520No description available.Chr14+View
PT07G04650No description available.Chr07-View
PT05G14090No description available.Chr05-View

Ricinus communis

Gene id Description Chromosome Strand Multiplicon
RC30170G01900No description available.30170+View

Solanum lycopersicum

Gene id Description Chromosome Strand Multiplicon
SL02G093130Ethylene-responsive transcription factor 5 (AHRD V1 *-*- EF102_ARATH)%3B contains Interpro domain(s) IPR001471 Pathogenesis-related transcriptional factor and ERF%2C DNA-bindingch02+View
SL04G078640Ethylene-responsive transcription factor 5 (AHRD V1 *-*- EF102_ARATH)%3B contains Interpro domain(s) IPR001471 Pathogenesis-related transcriptional factor and ERF%2C DNA-bindingch04+View

Solanum tuberosum

Gene id Description Chromosome Strand Multiplicon
ST02G031600Ethylene-responsive transcription factor 9 (AHRD V1 *-*- ERF80_ARATH); contains Interpro domain(s) IPR001471 Pathogenesis-related transcriptional factor and ERF, DNA-bindingchr02+View
ST04G031580Ethylene-responsive transcription factor 5 (AHRD V1 *-*- EF102_ARATH); contains Interpro domain(s) IPR001471 Pathogenesis-related transcriptional factor and ERF, DNA-bindingchr04+View

Theobroma cacao

Gene id Description Chromosome Strand Multiplicon
TC0001G05810No description available.scaffold_1-View

Thellungiella parvula

Gene id Description Chromosome Strand Multiplicon
TP7G34870similar to AT4G36900|RAP2.10 (related to AP2 10)ch7-6-View
TP4G02330similar to AT2G23340|AP2 domain-containing transcription factor, putativech4-2+View

Vitis vinifera

Gene id Description Chromosome Strand Multiplicon
VV07G05100name=GSVIVG01022076001;chr7+View


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Chromosome
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