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Functional clusters
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BLAST
WorkbenchAnchorpoints
- Gene id
- AL3G22110
- Organism
- Arabidopsis lyrata
Paralogs (intra-species colinear regions)
No paralogous anchorpoints available
Orthologs (inter-species colinear regions)
Arabidopsis thaliana
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| AT3G20290 | EPS15 homology domain 1 EPS15 homology domain 1 (EHD1); FUNCTIONS IN: GTP binding, GTPase activity, calcium ion binding; INVOLVED IN: endocytosis; LOCATED IN: endosome, microsome, membrane, cytoplasm; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: EF-HAND 2 (InterPro:IPR018249), EPS15 homology (EH) (InterPro:IPR000261), Dynamin, GTPase domain (InterPro:IPR001401), EF-hand-like domain (InterPro:IPR011992), Calcium-binding EF-hand (InterPro:IPR002048); BEST Arabidopsis thaliana protein match is: EPS15 homology domain 2 (TAIR:AT4G05520.1); Has 2747 Blast hits to 1834 proteins in 266 species: Archae - 2; Bacteria - 80; Metazoa - 1639; Fungi - 521; Plants - 217; Viruses - 0; Other Eukaryotes - 288 (source: NCBI BLink). Encodes AtEHD1, one of the Arabidopsis Eps15 homology domain proteins involved in endocytosis (AtEHD2, At4g05520). | 3 | - | View |
Brassica rapa
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| BR05G23320 | No description available. | A05 | + | View |
| BR01G30050 | No description available. | A01 | + | View |
Cucumis melo
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| CM00021G05100 | No description available. | CM3.5_scaffold00021 | - | View |
Capsella rubella
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| CRU_003G19310 | No description available. | scaffold_3 | - | View |
Citrus sinensis
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| CS00049G00390 | No description available. | scaffold00049 | + | View |
Glycine max
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| GM02G46350 | No description available. | Gm02 | + | View |
Manihot esculenta
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| ME06278G00460 | No description available. | scaffold06278 | - | View |
Solanum lycopersicum
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| SL07G064910 | EH-domain-containing protein 1 (AHRD V1 **** B6U193_MAIZE)%3B contains Interpro domain(s) IPR001401 Dynamin%2C GTPase region | ch07 | + | View |
| SL10G006110 | EH-domain-containing protein 1 (AHRD V1 **** B6U193_MAIZE)%3B contains Interpro domain(s) IPR001401 Dynamin%2C GTPase region | ch10 | - | View |
Solanum tuberosum
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| ST07G028940 | EH-domain-containing protein 1 (AHRD V1 **** B6U193_MAIZE); contains Interpro domain(s) IPR001401 Dynamin, GTPase region | chr07 | - | View |
| ST10G005490 | EH-domain-containing protein 1 (AHRD V1 **** B6U193_MAIZE); contains Interpro domain(s) IPR001401 Dynamin, GTPase region | chr10 | + | View |
Theobroma cacao
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| TC0007G02750 | No description available. | scaffold_7 | - | View |
Thellungiella parvula
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| TP3G18320 | similar to AT3G20290|ATEHD1 (EPS15 HOMOLOGY DOMAIN 1) | ch3-1 | - | View |
Vitis vinifera
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| VV19G11040 | name=GSVIVG01037715001; | chr19 | + | View |