Anchorpoints

Gene id
AL2G26600
Organism
Arabidopsis lyrata

Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
AL1G23180No description available.scaffold_1+View


Orthologs (inter-species colinear regions)

Arabidopsis thaliana

Gene id Description Chromosome Strand Multiplicon
AT1G21910Integrase-type DNA-binding superfamily protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: nucleus, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: Integrase-type DNA-binding superfamily protein (TAIR:AT1G77640.1); Has 6386 Blast hits to 5661 proteins in 267 species: Archae - 0; Bacteria - 0; Metazoa - 99; Fungi - 9; Plants - 5687; Viruses - 2; Other Eukaryotes - 589 (source: NCBI BLink). encodes a member of the DREB subfamily A-5 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 15 members in this subfamily including RAP2.1, RAP2.9 and RAP2.10. Integrase-type DNA-binding superfamily protein1+View
AT1G77640encodes a member of the DREB subfamily A-5 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 15 members in this subfamily including RAP2.1, RAP2.9 and RAP2.10. Integrase-type DNA-binding superfamily protein Integrase-type DNA-binding superfamily protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: nucleus, chloroplast; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: Integrase-type DNA-binding superfamily protein (TAIR:AT1G21910.1); Has 5272 Blast hits to 5255 proteins in 230 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 2; Plants - 5260; Viruses - 0; Other Eukaryotes - 8 (source: NCBI BLink).1+View

Brassica rapa

Gene id Description Chromosome Strand Multiplicon
BR08G24480No description available.A08-View
BR07G09730No description available.A07-View

Beta vulgaris

Gene id Description Chromosome Strand Multiplicon
BV1G02170No description available.Bvchr1.sca001+View

Citrullus lanatus

Gene id Description Chromosome Strand Multiplicon
CL11G09750No description available.Chr11-View

Cucumis melo

Gene id Description Chromosome Strand Multiplicon
CM00013G01030No description available.CM3.5_scaffold00013-View

Carica papaya

Gene id Description Chromosome Strand Multiplicon
CP00036G00400No description available.supercontig_36-View

Capsella rubella

Gene id Description Chromosome Strand Multiplicon
CRU_001G20480No description available.scaffold_1+View
CRU_002G23180No description available.scaffold_2+View

Eucalyptus grandis

Gene id Description Chromosome Strand Multiplicon
EG0006G32230No description available.scaffold_6-View

Fragaria vesca

Gene id Description Chromosome Strand Multiplicon
FV2G29040Ethylene-responsive transcription factor ERF012 (probable)LG2-View

Glycine max

Gene id Description Chromosome Strand Multiplicon
GM04G43040No description available.Gm04+View
GM06G11700No description available.Gm06-View
GM13G02860No description available.Gm13-View

Gossypium raimondii

Gene id Description Chromosome Strand Multiplicon
GR09G24450No description available.Chr09-View
GR10G04890No description available.Chr10-View

Malus domestica

Gene id Description Chromosome Strand Multiplicon
MD12G017750No description available.12+View

Manihot esculenta

Gene id Description Chromosome Strand Multiplicon
ME07238G00060No description available.scaffold07238-View
ME06853G00200No description available.scaffold06853+View

Medicago truncatula

Gene id Description Chromosome Strand Multiplicon
MT3G072610AP2 domain class transcription factorchr3+View
MT5G058470AP2 domain class transcription factorchr5+View

Prunus persica

Gene id Description Chromosome Strand Multiplicon
PPE_001G50580No description available.scaffold_1+View
PPE_001G46790No description available.scaffold_1-View

Populus trichocarpa

Gene id Description Chromosome Strand Multiplicon
PT05G17600No description available.Chr05-View
PT02G08560No description available.Chr02+View

Ricinus communis

Gene id Description Chromosome Strand Multiplicon
RC29908G00470No description available.29908-View

Solanum lycopersicum

Gene id Description Chromosome Strand Multiplicon
SL11G012980Ethylene-responsive transcription factor 9 (AHRD V1 *-*- ERF80_ARATH)%3B contains Interpro domain(s) IPR001471 Pathogenesis-related transcriptional factor and ERF%2C DNA-bindingch11+View

Theobroma cacao

Gene id Description Chromosome Strand Multiplicon
TC0008G11820No description available.scaffold_8-View

Thellungiella parvula

Gene id Description Chromosome Strand Multiplicon
TP1G19450similar to AT1G21910|AP2 domain-containing transcription factor family proteinch1-1+View
TP5G32800similar to AT1G77640|AP2 domain-containing transcription factor, putativech5-7+View


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Gene id
Species
Description
Chromosome
Strand