Anchorpoints
- Gene id
- AL2G23860
- Organism
- Arabidopsis lyrata
Paralogs (intra-species colinear regions)
Orthologs (inter-species colinear regions)
Arabidopsis thaliana
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
AT1G74990 | RING/U-box superfamily protein RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 4 anthesis, F mature embryo stage, 4 leaf senescence stage, petal differentiation and expansion stage, E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type, conserved site (InterPro:IPR017907), Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT1G19310.1); Has 4144 Blast hits to 4137 proteins in 330 species: Archae - 0; Bacteria - 0; Metazoa - 2459; Fungi - 476; Plants - 747; Viruses - 18; Other Eukaryotes - 444 (source: NCBI BLink). | 1 | - | View |
AT1G19310 | RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type, conserved site (InterPro:IPR017907), Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT2G23780.1); Has 4673 Blast hits to 4665 proteins in 300 species: Archae - 0; Bacteria - 6; Metazoa - 2731; Fungi - 589; Plants - 822; Viruses - 25; Other Eukaryotes - 500 (source: NCBI BLink). RING/U-box superfamily protein | 1 | - | View |
Amborella trichopoda
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
ATR_00059G01380 | No description available. | scaffold00059 | + | View |
Brassica rapa
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
BR07G30410 | No description available. | A07 | - | View |
BR04G13470 | No description available. | A04 | - | View |
BR06G13840 | No description available. | A06 | - | View |
Beta vulgaris
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
BV6G04500 | No description available. | Bvchr6.sca005 | + | View |
Citrullus lanatus
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CL10G10890 | No description available. | Chr10 | - | View |
CL08G15040 | No description available. | Chr8 | + | View |
CL01G07780 | No description available. | Chr1 | - | View |
Cucumis melo
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CM00007G05210 | No description available. | CM3.5_scaffold00007 | + | View |
CM00014G02710 | No description available. | CM3.5_scaffold00014 | - | View |
CM00029G00790 | No description available. | CM3.5_scaffold00029 | + | View |
Carica papaya
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CP00064G00430 | No description available. | supercontig_64 | - | View |
CP00062G01030 | No description available. | supercontig_62 | - | View |
Capsella rubella
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CRU_002G20560 | No description available. | scaffold_2 | - | View |
CRU_004G02890 | No description available. | scaffold_4 | - | View |
CRU_001G18100 | No description available. | scaffold_1 | - | View |
Citrus sinensis
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CS00002G03820 | No description available. | scaffold00002 | - | View |
Eucalyptus grandis
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
EG0009G20980 | No description available. | scaffold_9 | + | View |
EG0001G03690 | No description available. | scaffold_1 | - | View |
Fragaria vesca
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
FV2G51560 | RING finger protein 5 (probable) | LG2 | + | View |
FV5G37830 | RING finger protein 5 (probable) | LG5 | - | View |
Glycine max
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
GM11G06780 | No description available. | Gm11 | - | View |
GM04G03680 | No description available. | Gm04 | + | View |
GM06G03760 | No description available. | Gm06 | + | View |
Gossypium raimondii
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
GR10G01250 | No description available. | Chr10 | + | View |
GR03G01780 | No description available. | Chr03 | + | View |
GR02G12970 | No description available. | Chr02 | + | View |
Lotus japonicus
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
LJ2G031900 | No description available. | chr2 | - | View |
Malus domestica
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
MD08G003270 | No description available. | 8 | + | View |
MD02G013340 | No description available. | 2 | + | View |
MD15G019970 | No description available. | 15 | + | View |
Manihot esculenta
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
ME06683G00230 | No description available. | scaffold06683 | - | View |
ME07012G01520 | No description available. | scaffold07012 | + | View |
Medicago truncatula
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
MT1G021895 | zinc finger C C3HC4 type (RING finger) protein | chr1 | - | View |
MT5G019300 | zinc finger C C3HC4 type (RING finger) protein | chr5 | - | View |
Prunus persica
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
PPE_007G16960 | No description available. | scaffold_7 | - | View |
PPE_001G39150 | No description available. | scaffold_1 | + | View |
PPE_008G12320 | No description available. | scaffold_8 | + | View |
Populus trichocarpa
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
PT07G03160 | No description available. | Chr07 | + | View |
PT14G04040 | No description available. | Chr14 | - | View |
PT05G12790 | No description available. | Chr05 | + | View |
PT02G13300 | No description available. | Chr02 | - | View |
Ricinus communis
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
RC30170G03450 | No description available. | 30170 | - | View |
Solanum lycopersicum
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
SL01G109340 | RING finger protein 5 (AHRD V1 **-- B6UBI0_MAIZE)%3B contains Interpro domain(s) IPR001841 Zinc finger%2C RING-type | ch01 | - | View |
Solanum tuberosum
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
ST01G046670 | RING finger protein 5 (AHRD V1 **-- B6UBI0_MAIZE); contains Interpro domain(s) IPR001841 Zinc finger, RING-type | chr01 | - | View |
Theobroma cacao
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
TC0001G04030 | No description available. | scaffold_1 | + | View |
TC0008G02060 | No description available. | scaffold_8 | - | View |
Thellungiella parvula
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
TP5G30120 | similar to AT1G74990|zinc finger (C3HC4-type RING finger) family protein | ch5-7 | - | View |
TP4G02720 | similar to AT2G23780|zinc finger (C3HC4-type RING finger) family protein | ch4-2 | - | View |
TP1G17210 | similar to AT1G19310|zinc finger (C3HC4-type RING finger) family protein | ch1-1 | - | View |
Vitis vinifera
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
VV04G02780 | name=GSVIVG01019032001; | chr4 | - | View |