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WorkbenchAnchorpoints
- Gene id
- AL2G20990
- Organism
- Arabidopsis lyrata
Paralogs (intra-species colinear regions)
Orthologs (inter-species colinear regions)
Arabidopsis thaliana
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| AT1G72210 | basic helix-loop-helix (bHLH) DNA-binding superfamily protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT1G22490.1); Has 1596 Blast hits to 1587 proteins in 129 species: Archae - 0; Bacteria - 0; Metazoa - 28; Fungi - 30; Plants - 1534; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). basic helix-loop-helix (bHLH) DNA-binding superfamily protein | 1 | + | View |
| AT1G22490 | basic helix-loop-helix (bHLH) DNA-binding superfamily protein basic helix-loop-helix (bHLH) DNA-binding superfamily protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT1G72210.1); Has 1544 Blast hits to 1534 proteins in 133 species: Archae - 0; Bacteria - 0; Metazoa - 47; Fungi - 34; Plants - 1460; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). | 1 | - | View |
Brassica rapa
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| BR07G28380 | No description available. | A07 | + | View |
| BR02G21390 | No description available. | A02 | + | View |
| BR07G21270 | No description available. | A07 | - | View |
Capsella rubella
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| CRU_001G21090 | No description available. | scaffold_1 | - | View |
| CRU_002G17940 | No description available. | scaffold_2 | + | View |
Gossypium raimondii
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| GR06G21720 | No description available. | Chr06 | - | View |
Thellungiella parvula
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| TP5G27300 | similar to AT1G72210|basic helix-loop-helix (bHLH) family protein (bHLH096) | ch5-6 | + | View |
| TP1G19970 | similar to AT1G22490|basic helix-loop-helix (bHLH) family protein | ch1-1 | - | View |