Anchorpoints
- Gene id
- AL2G17060
- Organism
- Arabidopsis lyrata
Paralogs (intra-species colinear regions)
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
AL2G22810 | No description available. | scaffold_2 | - | View |
AL1G19380 | No description available. | scaffold_1 | - | View |
Orthologs (inter-species colinear regions)
Arabidopsis thaliana
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
AT1G18470 | Transmembrane Fragile-X-F-associated protein; FUNCTIONS IN: zinc ion binding; LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Transmembrane Fragile-X-F-associated protein (InterPro:IPR019396), Zinc finger, RING-type (InterPro:IPR001841); BEST Arabidopsis thaliana protein match is: Transmembrane Fragile-X-F-associated protein (TAIR:AT1G73950.1); Has 2617 Blast hits to 2612 proteins in 233 species: Archae - 0; Bacteria - 0; Metazoa - 1517; Fungi - 24; Plants - 500; Viruses - 234; Other Eukaryotes - 342 (source: NCBI BLink). Transmembrane Fragile-X-F-associated protein | 1 | - | View |
AT1G68820 | Transmembrane Fragile-X-F-associated protein Transmembrane Fragile-X-F-associated protein; FUNCTIONS IN: zinc ion binding; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Transmembrane Fragile-X-F-associated protein (InterPro:IPR019396), Zinc finger, RING-type (InterPro:IPR001841); BEST Arabidopsis thaliana protein match is: Transmembrane Fragile-X-F-associated protein (TAIR:AT1G73950.1); Has 2761 Blast hits to 2715 proteins in 222 species: Archae - 0; Bacteria - 0; Metazoa - 1602; Fungi - 4; Plants - 542; Viruses - 213; Other Eukaryotes - 400 (source: NCBI BLink). | 1 | + | View |
AT1G73930 | unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1630 (InterPro:IPR012860); Has 290 Blast hits to 263 proteins in 104 species: Archae - 0; Bacteria - 0; Metazoa - 148; Fungi - 30; Plants - 49; Viruses - 0; Other Eukaryotes - 63 (source: NCBI BLink). | 1 | - | View |
Brassica rapa
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
BR06G13120 | No description available. | A06 | - | View |
BR07G29660 | No description available. | A07 | - | View |
BR07G25780 | No description available. | A07 | + | View |
BR02G22370 | No description available. | A02 | - | View |
BR02G19420 | No description available. | A02 | + | View |
Cucumis melo
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CM00030G02170 | No description available. | CM3.5_scaffold00030 | + | View |
Capsella rubella
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CRU_002G14500 | No description available. | scaffold_2 | + | View |
CRU_001G17320 | No description available. | scaffold_1 | - | View |
CRU_002G19530 | No description available. | scaffold_2 | - | View |
Citrus sinensis
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CS00019G00770 | No description available. | scaffold00019 | - | View |
Eucalyptus grandis
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
EG0002G25010 | No description available. | scaffold_2 | - | View |
Fragaria vesca
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
FV0G02440 | Transmembrane protein 185B (probable) | scf0513158 | - | View |
Glycine max
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
GM20G32670 | No description available. | Gm20 | + | View |
GM06G23447 | No description available. | Gm06 | + | View |
GM05G07960 | No description available. | Gm05 | + | View |
Gossypium raimondii
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
GR13G07990 | No description available. | Chr13 | + | View |
Malus domestica
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
MD16G002070 | No description available. | 16 | - | View |
MD13G003060 | No description available. | 13 | - | View |
MD14G020790 | No description available. | 14 | + | View |
MD06G017570 | No description available. | 6 | + | View |
Manihot esculenta
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
ME06656G00080 | No description available. | scaffold06656 | - | View |
ME08359G00570 | No description available. | scaffold08359 | - | View |
Medicago truncatula
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
MT1G093730 | transmembrane fragile-X-F-associated protein | chr1 | - | View |
Prunus persica
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
PPE_005G22000 | No description available. | scaffold_5 | + | View |
PPE_001G31520 | No description available. | scaffold_1 | + | View |
Populus trichocarpa
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
PT10G12990 | No description available. | Chr10 | - | View |
PT08G11640 | No description available. | Chr08 | + | View |
PT12G06010 | No description available. | Chr12 | + | View |
Ricinus communis
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
RC30174G03980 | No description available. | 30174 | - | View |
RC29738G00450 | No description available. | 29738 | + | View |
Solanum lycopersicum
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
SL05G009870 | Baculoviral IAP repeat-containing 8 (AHRD V1 *--- Q6PIA0_HUMAN)%3B contains Interpro domain(s) IPR019396 Transmembrane Fragile-X-F-associated protein | ch05 | - | View |
Solanum tuberosum
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
ST05G007450 | Baculoviral IAP repeat-containing 8 (AHRD V1 *--- Q6PIA0_HUMAN); contains Interpro domain(s) IPR019396 Transmembrane Fragile-X-F-associated protein | chr05 | + | View |
Theobroma cacao
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
TC0002G35930 | No description available. | scaffold_2 | - | View |
Thellungiella parvula
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
TP5G23930 | similar to AT1G68820|membrane protein, putative | ch5-6 | + | View |
TP1G16410 | similar to AT1G18470|zinc finger (C3HC4-type RING finger) family protein | ch1-1 | - | View |
TP5G29130 | No description available. | ch5-7 | - | View |
Vitis vinifera
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
VV01G08280 | name=GSVIVG01011959001; | chr1 | + | View |
VV17G05610 | name=GSVIVG01008239001; | chr17 | - | View |