Anchorpoints

Gene id
AL2G17060
Organism
Arabidopsis lyrata

Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
AL2G22810No description available.scaffold_2-View
AL1G19380No description available.scaffold_1-View


Orthologs (inter-species colinear regions)

Arabidopsis thaliana

Gene id Description Chromosome Strand Multiplicon
AT1G18470Transmembrane Fragile-X-F-associated protein; FUNCTIONS IN: zinc ion binding; LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Transmembrane Fragile-X-F-associated protein (InterPro:IPR019396), Zinc finger, RING-type (InterPro:IPR001841); BEST Arabidopsis thaliana protein match is: Transmembrane Fragile-X-F-associated protein (TAIR:AT1G73950.1); Has 2617 Blast hits to 2612 proteins in 233 species: Archae - 0; Bacteria - 0; Metazoa - 1517; Fungi - 24; Plants - 500; Viruses - 234; Other Eukaryotes - 342 (source: NCBI BLink). Transmembrane Fragile-X-F-associated protein1-View
AT1G68820Transmembrane Fragile-X-F-associated protein Transmembrane Fragile-X-F-associated protein; FUNCTIONS IN: zinc ion binding; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Transmembrane Fragile-X-F-associated protein (InterPro:IPR019396), Zinc finger, RING-type (InterPro:IPR001841); BEST Arabidopsis thaliana protein match is: Transmembrane Fragile-X-F-associated protein (TAIR:AT1G73950.1); Has 2761 Blast hits to 2715 proteins in 222 species: Archae - 0; Bacteria - 0; Metazoa - 1602; Fungi - 4; Plants - 542; Viruses - 213; Other Eukaryotes - 400 (source: NCBI BLink).1+View
AT1G73930unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1630 (InterPro:IPR012860); Has 290 Blast hits to 263 proteins in 104 species: Archae - 0; Bacteria - 0; Metazoa - 148; Fungi - 30; Plants - 49; Viruses - 0; Other Eukaryotes - 63 (source: NCBI BLink).1-View

Brassica rapa

Gene id Description Chromosome Strand Multiplicon
BR06G13120No description available.A06-View
BR07G29660No description available.A07-View
BR07G25780No description available.A07+View
BR02G22370No description available.A02-View
BR02G19420No description available.A02+View

Cucumis melo

Gene id Description Chromosome Strand Multiplicon
CM00030G02170No description available.CM3.5_scaffold00030+View

Capsella rubella

Gene id Description Chromosome Strand Multiplicon
CRU_002G14500No description available.scaffold_2+View
CRU_001G17320No description available.scaffold_1-View
CRU_002G19530No description available.scaffold_2-View

Citrus sinensis

Gene id Description Chromosome Strand Multiplicon
CS00019G00770No description available.scaffold00019-View

Eucalyptus grandis

Gene id Description Chromosome Strand Multiplicon
EG0002G25010No description available.scaffold_2-View

Fragaria vesca

Gene id Description Chromosome Strand Multiplicon
FV0G02440Transmembrane protein 185B (probable)scf0513158-View

Glycine max

Gene id Description Chromosome Strand Multiplicon
GM20G32670No description available.Gm20+View
GM06G23447No description available.Gm06+View
GM05G07960No description available.Gm05+View

Gossypium raimondii

Gene id Description Chromosome Strand Multiplicon
GR13G07990No description available.Chr13+View

Malus domestica

Gene id Description Chromosome Strand Multiplicon
MD16G002070No description available.16-View
MD13G003060No description available.13-View
MD14G020790No description available.14+View
MD06G017570No description available.6+View

Manihot esculenta

Gene id Description Chromosome Strand Multiplicon
ME06656G00080No description available.scaffold06656-View
ME08359G00570No description available.scaffold08359-View

Medicago truncatula

Gene id Description Chromosome Strand Multiplicon
MT1G093730transmembrane fragile-X-F-associated proteinchr1-View

Prunus persica

Gene id Description Chromosome Strand Multiplicon
PPE_005G22000No description available.scaffold_5+View
PPE_001G31520No description available.scaffold_1+View

Populus trichocarpa

Gene id Description Chromosome Strand Multiplicon
PT10G12990No description available.Chr10-View
PT08G11640No description available.Chr08+View
PT12G06010No description available.Chr12+View

Ricinus communis

Gene id Description Chromosome Strand Multiplicon
RC30174G03980No description available.30174-View
RC29738G00450No description available.29738+View

Solanum lycopersicum

Gene id Description Chromosome Strand Multiplicon
SL05G009870Baculoviral IAP repeat-containing 8 (AHRD V1 *--- Q6PIA0_HUMAN)%3B contains Interpro domain(s) IPR019396 Transmembrane Fragile-X-F-associated proteinch05-View

Solanum tuberosum

Gene id Description Chromosome Strand Multiplicon
ST05G007450Baculoviral IAP repeat-containing 8 (AHRD V1 *--- Q6PIA0_HUMAN); contains Interpro domain(s) IPR019396 Transmembrane Fragile-X-F-associated proteinchr05+View

Theobroma cacao

Gene id Description Chromosome Strand Multiplicon
TC0002G35930No description available.scaffold_2-View

Thellungiella parvula

Gene id Description Chromosome Strand Multiplicon
TP5G23930similar to AT1G68820|membrane protein, putativech5-6+View
TP1G16410similar to AT1G18470|zinc finger (C3HC4-type RING finger) family proteinch1-1-View
TP5G29130No description available.ch5-7-View

Vitis vinifera

Gene id Description Chromosome Strand Multiplicon
VV01G08280name=GSVIVG01011959001;chr1+View
VV17G05610name=GSVIVG01008239001;chr17-View


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Gene id
Species
Description
Chromosome
Strand