Expansion plot
Gene family finder
Ks-graphs
Skyline plot
Synteny plot
WGDotplot
Functional clusters
WGMapping
BLAST
WorkbenchAnchorpoints
- Gene id
- AL2G17040
- Organism
- Arabidopsis lyrata
Paralogs (intra-species colinear regions)
No paralogous anchorpoints available
Orthologs (inter-species colinear regions)
Arabidopsis thaliana
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| AT1G68800 | Encodes a TCP transcription factor, closely related to teosinte branched1, arrests axillary bud development and prevents axillary bud outgrowth. Transcription level and mutant phenotype are weaker than its homolog BRC1 (At3G18550). TCP domain protein 12 TCP domain protein 12 (TCP12); CONTAINS InterPro DOMAIN/s: Transcription factor, TCP (InterPro:IPR005333), CYC/TB1, R domain (InterPro:IPR017888), Transcription factor TCP subgroup (InterPro:IPR017887); BEST Arabidopsis thaliana protein match is: TCP family transcription factor (TAIR:AT1G67260.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). | 1 | - | View |
Brassica rapa
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| BR02G19400 | No description available. | A02 | - | View |
Citrullus lanatus
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| CL11G13440 | No description available. | Chr11 | - | View |
| CL04G11130 | No description available. | Chr4 | + | View |
| CL05G24120 | No description available. | Chr5 | + | View |
Cucumis melo
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| CM00030G02150 | No description available. | CM3.5_scaffold00030 | + | View |
| CM00016G05470 | No description available. | CM3.5_scaffold00016 | - | View |
Capsella rubella
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| CRU_002G14470 | No description available. | scaffold_2 | - | View |
Citrus sinensis
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| CS00019G00800 | No description available. | scaffold00019 | + | View |
Eucalyptus grandis
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| EG0007G17990 | No description available. | scaffold_7 | + | View |
Fragaria vesca
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| FV0G02480 | Transcription factor CYCLOIDEA (similar to) | scf0513158 | + | View |
Glycine max
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| GM05G07943 | No description available. | Gm05 | - | View |
| GM08G28691 | No description available. | Gm08 | - | View |
| GM18G51581 | No description available. | Gm18 | - | View |
| GM06G23410 | No description available. | Gm06 | - | View |
Gossypium raimondii
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| GR08G18680 | No description available. | Chr08 | + | View |
Malus domestica
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| MD06G017560 | No description available. | 6 | - | View |
| MD13G003090 | No description available. | 13 | + | View |
| MD14G020750 | No description available. | 14 | - | View |
Manihot esculenta
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| ME08359G00590 | No description available. | scaffold08359 | + | View |
| ME06656G00110 | No description available. | scaffold06656 | + | View |
Prunus persica
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| PPE_001G31490 | No description available. | scaffold_1 | - | View |
| PPE_005G21980 | No description available. | scaffold_5 | - | View |
Populus trichocarpa
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| PT12G05990 | No description available. | Chr12 | - | View |
| PT08G11580 | No description available. | Chr08 | - | View |
| PT10G13020 | No description available. | Chr10 | + | View |
Ricinus communis
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| RC30174G04010 | No description available. | 30174 | + | View |
| RC29738G00420 | No description available. | 29738 | - | View |
Solanum lycopersicum
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| SL05G009900 | CYCLOIDEA-like group 1B protein (Fragment) (AHRD V1 *-*- Q6VM71_LUPDI)%3B contains Interpro domain(s) IPR005333 Transcription factor%2C TCP | ch05 | + | View |
| SL04G006980 | CYCLOIDEA-like group 1B protein (Fragment) (AHRD V1 *-*- Q6VM90_LUPAG)%3B contains Interpro domain(s) IPR005333 Transcription factor%2C TCP | ch04 | - | View |
Solanum tuberosum
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| ST05G007420 | Cycloidea-like protein group 1A (Fragment) (AHRD V1 *-*- Q19C88_LUPHI); contains Interpro domain(s) IPR005333 Transcription factor, TCP | chr05 | - | View |
Theobroma cacao
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| TC0002G35950 | No description available. | scaffold_2 | + | View |
Thellungiella parvula
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| TP5G23910 | similar to AT1G68800|TCP12 (TCP DOMAIN PROTEIN 12) | ch5-6 | - | View |
Vitis vinifera
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| VV17G05570 | name=GSVIVG01008234001; | chr17 | + | View |
| VV01G08300 | name=GSVIVG01011962001; | chr1 | - | View |