Expansion plot
Gene family finder
Ks-graphs
Skyline plot
Synteny plot
WGDotplot
Functional clusters
WGMapping
BLAST
WorkbenchAnchorpoints
- Gene id
- AL2G15850
- Organism
- Arabidopsis lyrata
Paralogs (intra-species colinear regions)
No paralogous anchorpoints available
Orthologs (inter-species colinear regions)
Arabidopsis thaliana
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| AT1G67800 | Copine (Calcium-dependent phospholipid-binding protein) family; FUNCTIONS IN: zinc ion binding; INVOLVED IN: N-terminal protein myristoylation; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Copine (InterPro:IPR010734), von Willebrand factor, type A (InterPro:IPR002035); BEST Arabidopsis thaliana protein match is: RING domain ligase2 (TAIR:AT5G14420.2); Has 1564 Blast hits to 1559 proteins in 126 species: Archae - 0; Bacteria - 2; Metazoa - 894; Fungi - 2; Plants - 394; Viruses - 12; Other Eukaryotes - 260 (source: NCBI BLink). Copine (Calcium-dependent phospholipid-binding protein) family | 1 | - | View |
Brassica rapa
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| BR07G24990 | No description available. | A07 | - | View |
| BR09G18930 | No description available. | A09 | - | View |
Beta vulgaris
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| BV6G19660 | No description available. | Bvchr6.sca026 | + | View |
Citrullus lanatus
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| CL05G26940 | No description available. | Chr5 | + | View |
Cucumis melo
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| CM00016G02400 | No description available. | CM3.5_scaffold00016 | - | View |
Carica papaya
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| CP00033G00580 | No description available. | supercontig_33 | + | View |
Capsella rubella
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| CRU_001G24540 | No description available. | scaffold_1 | + | View |
| CRU_002G13370 | No description available. | scaffold_2 | - | View |
Citrus sinensis
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| CS00003G01580 | No description available. | scaffold00003 | - | View |
Eucalyptus grandis
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| EG0002G26770 | No description available. | scaffold_2 | - | View |
| EG0008G19770 | No description available. | scaffold_8 | - | View |
Fragaria vesca
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| FV0G11050 | E3 ubiquitin-protein ligase RGLG2 (similar to) | scf0513160 | + | View |
Glycine max
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| GM08G13900 | No description available. | Gm08 | - | View |
| GM05G30701 | No description available. | Gm05 | - | View |
| GM18G01650 | No description available. | Gm18 | - | View |
Gossypium raimondii
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| GR09G33520 | No description available. | Chr09 | - | View |
| GR05G17570 | No description available. | Chr05 | - | View |
Malus domestica
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| MD13G007810 | No description available. | 13 | + | View |
| MD16G006180 | No description available. | 16 | + | View |
Manihot esculenta
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| ME12211G00580 | No description available. | scaffold12211 | + | View |
| ME04175G00460 | No description available. | scaffold04175 | + | View |
Medicago truncatula
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| MT8G089670 | E3 ubiquitin-protein ligase RGLG2-like protein | chr8 | - | View |
| MT3G086520 | E3 ubiquitin-protein ligase RGLG2-like protein | chr3 | - | View |
| MT7G033100 | E3 ubiquitin-protein ligase RGLG2-like protein | chr7 | - | View |
Oryza sativa ssp. japonica
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| OS01G68060 | copine, putative, expressed | 1 | - | View |
Prunus persica
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| PPE_001G25240 | No description available. | scaffold_1 | - | View |
Populus trichocarpa
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| PT10G04960 | No description available. | Chr10 | + | View |
| PT08G18360 | No description available. | Chr08 | - | View |
Ricinus communis
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| RC29929G02950 | No description available. | 29929 | - | View |
Solanum lycopersicum
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| SL02G093520 | Copine-like protein (AHRD V1 ***- Q153E2_ORYSJ)%3B contains Interpro domain(s) IPR010734 Copine | ch02 | + | View |
Solanum tuberosum
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| ST02G036690 | Copine-like protein (AHRD V1 ***- Q153E2_ORYSJ); contains Interpro domain(s) IPR010734 Copine | chr02 | + | View |
Theobroma cacao
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| TC0002G26520 | No description available. | scaffold_2 | + | View |
| TC0004G02080 | No description available. | scaffold_4 | + | View |
Thellungiella parvula
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| TP5G22810 | similar to AT1G67800|copine-related | ch5-6 | - | View |
| TP1G23240 | similar to AT1G67800|copine-related | ch1-1 | + | View |
Vitis vinifera
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| VV01G00310 | name=GSVIVG01000570001; | chr1 | - | View |