Anchorpoints

Gene id
AL1G24660
Organism
Arabidopsis lyrata

Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
AL2G19720No description available.scaffold_2-View


Orthologs (inter-species colinear regions)

Arabidopsis thaliana

Gene id Description Chromosome Strand Multiplicon
AT1G71020ARM repeat superfamily protein; FUNCTIONS IN: ubiquitin-protein ligase activity, binding; INVOLVED IN: protein ubiquitination; LOCATED IN: ubiquitin ligase complex; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: U box domain (InterPro:IPR003613), Armadillo-like helical (InterPro:IPR011989), Armadillo (InterPro:IPR000225), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: ARM repeat superfamily protein (TAIR:AT1G23030.1); Has 6269 Blast hits to 4386 proteins in 290 species: Archae - 0; Bacteria - 18; Metazoa - 1236; Fungi - 624; Plants - 3669; Viruses - 3; Other Eukaryotes - 719 (source: NCBI BLink). ARM repeat superfamily protein1-View
AT1G23030ARM repeat superfamily protein; FUNCTIONS IN: ubiquitin-protein ligase activity, binding; INVOLVED IN: response to chitin; LOCATED IN: ubiquitin ligase complex; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: U box domain (InterPro:IPR003613), Armadillo-like helical (InterPro:IPR011989), Armadillo (InterPro:IPR000225), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: ARM repeat superfamily protein (TAIR:AT1G71020.1); Has 7493 Blast hits to 5002 proteins in 288 species: Archae - 0; Bacteria - 26; Metazoa - 2087; Fungi - 726; Plants - 3867; Viruses - 3; Other Eukaryotes - 784 (source: NCBI BLink). ARM repeat superfamily protein1+View

Brassica rapa

Gene id Description Chromosome Strand Multiplicon
BR09G31370No description available.A09-View
BR07G09160No description available.A07-View
BR07G27530No description available.A07-View

Citrullus lanatus

Gene id Description Chromosome Strand Multiplicon
CL07G07730No description available.Chr7-View

Cucumis melo

Gene id Description Chromosome Strand Multiplicon
CM00033G00720No description available.CM3.5_scaffold00033+View

Capsella rubella

Gene id Description Chromosome Strand Multiplicon
CRU_002G16820No description available.scaffold_2-View
CRU_001G21620No description available.scaffold_1+View

Citrus sinensis

Gene id Description Chromosome Strand Multiplicon
CS00034G00690No description available.scaffold00034-View

Eucalyptus grandis

Gene id Description Chromosome Strand Multiplicon
EG0007G16690No description available.scaffold_7-View

Fragaria vesca

Gene id Description Chromosome Strand Multiplicon
FV0G06490U-box domain-containing protein 10 (putative)scf0513158+View

Gossypium raimondii

Gene id Description Chromosome Strand Multiplicon
GR02G18020No description available.Chr02-View

Malus domestica

Gene id Description Chromosome Strand Multiplicon
MD16G000360No description available.16-View
MD13G001790No description available.13-View

Manihot esculenta

Gene id Description Chromosome Strand Multiplicon
ME00318G00260No description available.scaffold00318+View
ME04043G00280No description available.scaffold04043+View
ME04251G00170No description available.scaffold04251-View

Prunus persica

Gene id Description Chromosome Strand Multiplicon
PPE_001G33280No description available.scaffold_1+View

Populus trichocarpa

Gene id Description Chromosome Strand Multiplicon
PT10G11390No description available.Chr10-View
PT08G12860No description available.Chr08+View

Ricinus communis

Gene id Description Chromosome Strand Multiplicon
RC29816G00020No description available.29816+View

Solanum lycopersicum

Gene id Description Chromosome Strand Multiplicon
SL05G008230U-box domain-containing protein 11 (AHRD V1 **-- PUB11_ARATH)%3B contains Interpro domain(s) IPR011989 Armadillo-like helicalch05-View
SL04G007640U-box domain-containing protein 10 (AHRD V1 **-- PUB10_ARATH)%3B contains Interpro domain(s) IPR011989 Armadillo-like helicalch04+View

Theobroma cacao

Gene id Description Chromosome Strand Multiplicon
TC0002G27980No description available.scaffold_2+View

Thellungiella parvula

Gene id Description Chromosome Strand Multiplicon
TP5G26190similar to AT1G71020|armadillo/beta-catenin repeat family protein / U-box domain-containing proteinch5-6-View
TP1G20480similar to AT1G23030|armadillo/beta-catenin repeat family protein / U-box domain-containing proteinch1-1+View

Vitis vinifera

Gene id Description Chromosome Strand Multiplicon
VV01G06720name=GSVIVG01011767001;chr1+View

Zea mays

Gene id Description Chromosome Strand Multiplicon
ZM06G24920No description available.6+View


Download

Gene id
Species
Description
Chromosome
Strand