Expansion plot
Gene family finder
Ks-graphs
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Synteny plot
WGDotplot
Functional clusters
WGMapping
BLAST
WorkbenchAnchorpoints
- Gene id
- AL1G20100
- Organism
- Arabidopsis lyrata
Paralogs (intra-species colinear regions)
No paralogous anchorpoints available
Orthologs (inter-species colinear regions)
Arabidopsis thaliana
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| AT1G19150 | photosystem I light harvesting complex gene 6 PSI type II chlorophyll a/b-binding protein (Lhca2*1) mRNA, photosystem I light harvesting complex gene 6 (LHCA6); FUNCTIONS IN: chlorophyll binding; INVOLVED IN: response to blue light, response to red light, response to far red light, photosynthesis; LOCATED IN: light-harvesting complex, chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Chlorophyll A-B binding protein (InterPro:IPR001344); BEST Arabidopsis thaliana protein match is: photosystem I light harvesting complex gene 2 (TAIR:AT3G61470.1); Has 2345 Blast hits to 2241 proteins in 223 species: Archae - 0; Bacteria - 0; Metazoa - 3; Fungi - 0; Plants - 1989; Viruses - 0; Other Eukaryotes - 353 (source: NCBI BLink). | 1 | + | View |
Brassica rapa
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| BR08G25700 | No description available. | A08 | - | View |
Beta vulgaris
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| BV8G14390 | No description available. | Bvchr8.sca017 | - | View |
Citrullus lanatus
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| CL08G01520 | No description available. | Chr8 | - | View |
| CL03G14600 | No description available. | Chr3 | + | View |
Cucumis melo
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| CM00025G03350 | No description available. | CM3.5_scaffold00025 | - | View |
Carica papaya
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| CP00028G00110 | No description available. | supercontig_28 | + | View |
Capsella rubella
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| CRU_001G17980 | No description available. | scaffold_1 | + | View |
Eucalyptus grandis
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| EG0003G25870 | No description available. | scaffold_3 | - | View |
Fragaria vesca
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| FV1G10660 | Chlorophyll a-b binding protein, chloroplastic, Precursor (similar to) | LG1 | - | View |
Glycine max
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| GM16G26130 | No description available. | Gm16 | + | View |
Gossypium raimondii
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| GR02G13210 | No description available. | Chr02 | - | View |
| GR01G01640 | No description available. | Chr01 | - | View |
Manihot esculenta
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| ME09570G00130 | No description available. | scaffold09570 | + | View |
Medicago truncatula
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| MT2G042720 | light-harvesting complex I chlorophyll A/B-binding protein | chr2 | - | View |
Prunus persica
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| PPE_007G21500 | No description available. | scaffold_7 | + | View |
| PPE_005G19990 | No description available. | scaffold_5 | - | View |
Thellungiella parvula
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| TP1G17060 | similar to AT1G19150|LHCA6 | ch1-1 | + | View |