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WorkbenchAnchorpoints
- Gene id
- AL1G04620
- Organism
- Arabidopsis lyrata
Paralogs (intra-species colinear regions)
Orthologs (inter-species colinear regions)
Arabidopsis thaliana
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| AT2G32480 | ARABIDOPSIS SERIN PROTEASE Metalloprotease essential for plastid development. Located in the inner membrane of chloroplasts. ARABIDOPSIS SERIN PROTEASE (ARASP); FUNCTIONS IN: metalloendopeptidase activity; INVOLVED IN: proteolysis, chloroplast organization; LOCATED IN: chloroplast, plastid, chloroplast inner membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase M50 (InterPro:IPR008915), PDZ/DHR/GLGF (InterPro:IPR001478), Peptidase M50, putative membrane-associated zinc metallopeptidase (InterPro:IPR004387); BEST Arabidopsis thaliana protein match is: Peptidase M50 family protein (TAIR:AT1G05140.1); Has 10037 Blast hits to 7541 proteins in 2236 species: Archae - 41; Bacteria - 6710; Metazoa - 4; Fungi - 0; Plants - 70; Viruses - 0; Other Eukaryotes - 3212 (source: NCBI BLink). | 2 | - | View |
| AT1G05140 | Peptidase M50 family protein Peptidase M50 family protein; FUNCTIONS IN: metalloendopeptidase activity; INVOLVED IN: proteolysis; LOCATED IN: chloroplast, plastid; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase M50 (InterPro:IPR008915), PDZ/DHR/GLGF (InterPro:IPR001478), Peptidase M50, putative membrane-associated zinc metallopeptidase (InterPro:IPR004387); BEST Arabidopsis thaliana protein match is: ARABIDOPSIS SERIN PROTEASE (TAIR:AT2G32480.1); Has 10190 Blast hits to 7652 proteins in 2240 species: Archae - 41; Bacteria - 6892; Metazoa - 13; Fungi - 4; Plants - 72; Viruses - 0; Other Eukaryotes - 3168 (source: NCBI BLink). | 1 | + | View |
Brassica rapa
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| BR05G11830 | No description available. | A05 | - | View |
| BR10G02600 | No description available. | A10 | - | View |
Beta vulgaris
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| BV4G11510 | No description available. | Bvchr4.sca001 | + | View |
Citrullus lanatus
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| CL02G08440 | No description available. | Chr2 | - | View |
Cucumis melo
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| CM00037G00910 | No description available. | CM3.5_scaffold00037 | + | View |
Capsella rubella
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| CRU_004G13390 | No description available. | scaffold_4 | - | View |
| CRU_001G04080 | No description available. | scaffold_1 | + | View |
Eucalyptus grandis
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| EG0001G09030 | No description available. | scaffold_1 | + | View |
Fragaria vesca
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| FV1G16560 | Putative zinc metalloprotease slr1821 (probable) | LG1 | - | View |
Glycine max
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| GM06G46301 | No description available. | Gm06 | - | View |
| GM12G10490 | No description available. | Gm12 | + | View |
Malus domestica
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| MD17G008580 | No description available. | 17 | - | View |
Manihot esculenta
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| ME05214G00070 | No description available. | scaffold05214 | - | View |
Medicago truncatula
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| MT4G048590 | RIP metalloprotease RseP | chr4 | - | View |
Prunus persica
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| PPE_003G19620 | No description available. | scaffold_3 | + | View |
Populus trichocarpa
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| PT14G15400 | No description available. | Chr14 | - | View |
| PT02G22860 | No description available. | Chr02 | + | View |
Solanum lycopersicum
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| SL07G052290 | Membrane-associated zinc metalloprotease family protein expressed (AHRD V1 ***- Q84NY6_ORYSJ)%3B contains Interpro domain(s) IPR004387 Peptidase M50%2C putative membrane-associated zinc metallopeptidase | ch07 | + | View |
Thellungiella parvula
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| TP4G14840 | similar to AT2G32480|membrane-associated zinc metalloprotease, putative | ch4-6 | - | View |
| TP1G03990 | similar to AT1G05140|membrane-associated zinc metalloprotease, putative | ch1-1 | + | View |
Vitis vinifera
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| VV12G10840 | name=GSVIVG01030436001; | chr12 | - | View |