View conserved binding sites


Gene
ST03G010180
Description
tRNA-dihydrouridine synthase (AHRD V1 ***- D8S8E9_SELML); contains Interpro domain(s) IPR001269 tRNA-dihydrouridine synthase
Alias
gene:Sotub03g010180;Sotub03g010180.1.1;Sotub03g010180;Sotub03g010180.1.1
Binding siteNameDescriptionLocationPosition
Matrix_101ERF5Not availableUpstream-112
Upstream-113
Upstream-286
Matrix_119RRTF1Not availableUpstream-287
Matrix_138RRTF1Not availableUpstream-113
Upstream-114
Upstream-287
Matrix_146ORA47Not availableUpstream-286
Matrix_147ERF3;AT1G80580Not availableUpstream-114
Upstream-115
Upstream-288
Matrix_155RAP2.6;ERF110;ABR1Not availableUpstream-287
Matrix_166TGA4Not availableUpstream-55
Matrix_179AtMYB84;MYB36;MYB68;O49746_ARATHNot availableUpstream-106
Matrix_190ATERF1Not availableUpstream-285
Upstream-286
Matrix_224ERF1Not availableUpstream-113
Upstream-114
Upstream-287
Matrix_234RAP2.3Not availableUpstream-112
Upstream-113
Upstream-286
Matrix_243RAP2.12;RAP2.2Not availableUpstream-287
Matrix_252RAP2.6Not availableUpstream-112
Upstream-113
Upstream-286
Matrix_261ATERF-1Not availableUpstream-113
Upstream-114
Upstream-287
Matrix_272DEAR4Not availableUpstream-112
Upstream-113
Upstream-286
Matrix_287ERF2Not availableUpstream-112
Upstream-113
Upstream-286
Matrix_288RAP2.3Not availableUpstream-287
Matrix_295ERF1Not availableUpstream-114
Upstream-115
Upstream-288
Matrix_321HRDNot availableUpstream-113
Matrix_326AT5G07310;Rap2.6L;AT5G61890Not availableUpstream-113
Upstream-114
Upstream-287
Matrix_334AT3G23230Not availableUpstream-113
Upstream-114
Upstream-287
Matrix_343AT2G33710Not availableUpstream-112
Upstream-113
Upstream-286
Matrix_344ATERF15;AT4G18450Not availableUpstream-114
Upstream-115
Upstream-288
Matrix_355ERF10;ERF11Not availableUpstream-113
Upstream-114
Upstream-287
Matrix_360ORA59Not availableUpstream-114
Upstream-115
Upstream-288
Matrix_363RAP2.3Not availableUpstream-113
Upstream-114
Upstream-287
Matrix_374AT5G07580;AT5G61590Not availableUpstream-113
Matrix_377AT1G75490;DREB2C;AT2G40350;AT5G18450Not availableUpstream-113
Upstream-114
Upstream-287
Matrix_378ATERF1Not availableUpstream-112
Upstream-113
Upstream-286
Matrix_401MYB55Not availableUpstream-106
Matrix_406ATERF-7Not availableUpstream-114
Upstream-115
Upstream-288
Matrix_409DEAR3Not availableUpstream-113
Upstream-114
Upstream-287
Matrix_426CRF1;CRF2Not availableUpstream-113
Upstream-114
Upstream-287
Matrix_45DRNNot availableUpstream-114
Upstream-115
Upstream-288
Matrix_462ATERF-8Not availableUpstream-114
Upstream-115
Upstream-288
Matrix_473RRTF1Not availableUpstream-112
Upstream-113
Upstream-286
Matrix_484ATERF13Not availableUpstream-114
Upstream-115
Upstream-288
Matrix_493AT1G22985;AT1G71130Not availableUpstream-113
Upstream-114
Upstream-287
Matrix_496ATMYB15Not availableUpstream-106
Matrix_50ATERF14;AT5G43410Not availableUpstream-113
Upstream-114
Upstream-287
Matrix_506DRNL;ATERF-4Not availableUpstream-113
Upstream-114
Upstream-287
Matrix_510AtMYB84More than 80 R2R3-MYB regulatory genes in the genome of Arabidopsis thalianaUpstream-106
Matrix_517ERF12Not availableUpstream-114
Upstream-115
Upstream-288
Matrix_57WIN1;SHN3;SHN2Not availableUpstream-113
Upstream-114
Upstream-287
Matrix_86CRF5;CRF6;CRF4Not availableUpstream-113
Upstream-114
Upstream-287
Matrix_91CRF3Not availableUpstream-113
Upstream-114
Upstream-287
Motif_182MYB2CONSENSUSATMYB recognition site found in the promoters of the dehydration-responsive gene rd22 and many other genes in Arabidopsis; see MYB2 and MYBATRD22Upstream-119
Motif_221MYBCOREBinding site for all animal MYB and at least two plant MYB proteins ATMYB1 and ATMYB2, both isolated from Arabidopsis; ATMYB2 is involved in regulation of genes that are responsive to water stress in Arabidopsis; A petunia MYB protein (MYB.Ph3) is involved in regulation of flavonoid biosynthesisUpstream-119
Motif_313ERF1 BS in AtCHI-BCore of GCC-box found in many pathogen-responsive genes such as PDF1.2, Thi2.1, and PR4; Has been shown to function as ethylene-responsive element; Appears to play important roles in regulating jasmonate-responsive gene expression; Tomato Pti4 (ERF) regulates defence-related gene expression via GCC box and non-GCC box cis elements (Myb1 (GTTAGTT) and G-box(CACGTG)); Nuclear events in ethylene signaling: a transcriptional cascade mediated by ETHYLENE-INSENSITIVE3 and ETHYLENE-RESPONSE-FACTOR1;Molecular responses to dehydration and low temperatureUpstream-115
Upstream-288
Upstream-702
Motif_336MYBMOUSEBinding site for mouse c-myb proteinUpstream-119