View conserved binding sites


Gene
GM16G06410
Description
Adenylate kinase
Alias
Glyma16g06410;Glyma16g06410.1;PAC:26352584;Glyma16g06410.1
Binding siteNameDescriptionLocationPosition
Matrix_119RRTF1Not availableUpstream-60
Matrix_122ABF1;AREB2Not availableUpstream-175
Matrix_126RBENot availableUpstream-162
Matrix_129ABF1Not availableUpstream-1769
Matrix_138RRTF1Not availableUpstream-60
Matrix_14ZCW32;AT5G62610Not availableUpstream-174
Matrix_186FHY3Not availableUpstream-175
Matrix_217BES1A brassinosteroid transcriptional network revealed by genome-wide identification of BESI target genes in Arabidopsis thalianaUpstream-178
Matrix_252RAP2.6Not availableUpstream-61
Matrix_264ATAREB1Not availableUpstream-178
Matrix_285DDF1Not availableUpstream-398
Matrix_288RAP2.3Not availableUpstream-60
Matrix_295ERF1Not availableUpstream-1050
Matrix_296GBF2Not availableUpstream-175
Matrix_300bZIP68;bZIP16Not availableUpstream-175
Matrix_301PIL5Not availableUpstream-1055
Matrix_356PRR5Not availableUpstream-182
Matrix_363RAP2.3Not availableUpstream-60
Matrix_378ATERF1Not availableUpstream-61
Matrix_403BZR1Not availableUpstream-1058
Matrix_406ATERF-7Not availableUpstream-1050
Matrix_416ASL5Not availableUpstream-167
Matrix_426CRF1;CRF2Not availableUpstream-8
Matrix_473RRTF1Not availableUpstream-61
Matrix_484ATERF13Not availableUpstream-1050
Matrix_53MYC3Not availableUpstream-177
Matrix_77PRR5Not availableUpstream-176
Motif_116INRNTPSADBInr (initiator) elements found in the tobacco psaDb gene promoter without TATA boxes; Light-responsive transcription of psaDb depends on Inr, but not TATA boxUpstream-43
Motif_218ABRERATCALABRE-related sequence or Repeated sequence motifs identified in the upstream regions of 162 Ca(2+)-responsive upregulated genes; see also ABREUpstream-173
Motif_313ERF1 BS in AtCHI-BCore of GCC-box found in many pathogen-responsive genes such as PDF1.2, Thi2.1, and PR4; Has been shown to function as ethylene-responsive element; Appears to play important roles in regulating jasmonate-responsive gene expression; Tomato Pti4 (ERF) regulates defence-related gene expression via GCC box and non-GCC box cis elements (Myb1 (GTTAGTT) and G-box(CACGTG)); Nuclear events in ethylene signaling: a transcriptional cascade mediated by ETHYLENE-INSENSITIVE3 and ETHYLENE-RESPONSE-FACTOR1;Molecular responses to dehydration and low temperatureUpstream-6
Motif_320AGCBOXNPGLBAGC box repeated twice in a 61 bp enhancer element in tobacco class I beta-1,3-glucanase (GLB) gene;GCC-box; Binding sequence of Arabidopsis AtERFs; AtERF1,2 and 5 functioned as activators of GCC box-dependent transcription; AtERF3 and 4 acted as repressors; AtERF proteins are stress signal-response factors; EREBP2 binding site; Conserved in most PR-protein genes; Rice MAPK (BWMK1) phosphorylates OS EREBP1, which enhance DNA-binding activity of the factor to the GCC boxUpstream-1050
Motif_658GT1CONSENSUSConsensus GT-1 binding site in many light-regulated genes, e.g., RBCS from many species, PHYA from oat and rice, spinach RCA and PETA, and bean CHS15; GT-1 can stabilize the TFIIA-TBP-DNA (TATA box) complex; The activation mechanism of GT-1 may be achieved through direct interaction between TFIIA and GT-1; Binding of GT-1-like factors to the PR-1a promoter influences the level of SA-inducible gene expressionUpstream-46