View conserved binding sites


Gene
GM15G30380
Description
CTP synthase
Alias
Glyma15g30380;Glyma15g30380.1;PAC:26330252;Glyma15g30380.1
Binding siteNameDescriptionLocationPosition
Matrix_101ERF5Not availableUpstream-644
Matrix_146ORA47Not availableUpstream-449
Matrix_224ERF1Not availableUpstream-643
Matrix_252RAP2.6Not availableUpstream-449
Matrix_261ATERF-1Not availableUpstream-644
Matrix_287ERF2Not availableUpstream-644
Matrix_295ERF1Not availableUpstream-644
Matrix_326AT5G07310;Rap2.6L;AT5G61890Not availableUpstream-643
Matrix_334AT3G23230Not availableUpstream-644
Upstream-645
Matrix_343AT2G33710Not availableUpstream-644
Matrix_355ERF10;ERF11Not availableUpstream-643
Matrix_360ORA59Not availableUpstream-644
Matrix_363RAP2.3Not availableUpstream-643
Matrix_372ANAC81DNA binding specificity of ATAF2, a NAC domain transcription factor targeted for degradation by Tobacco mosaic virusUpstream-592
Matrix_378ATERF1Not availableUpstream-449
Matrix_409DEAR3Not availableUpstream-448
Matrix_414AGL15Not availableUpstream-428
Upstream-601
Upstream-666
Matrix_426CRF1;CRF2Not availableUpstream-644
Upstream-645
Matrix_482AT2G25650;AT4G00270Not availableUpstream-645
Matrix_50ATERF14;AT5G43410Not availableUpstream-643
Matrix_506DRNL;ATERF-4Not availableUpstream-644
Upstream-645
Matrix_86CRF5;CRF6;CRF4Not availableUpstream-644
Upstream-645
Motif_313ERF1 BS in AtCHI-BCore of GCC-box found in many pathogen-responsive genes such as PDF1.2, Thi2.1, and PR4; Has been shown to function as ethylene-responsive element; Appears to play important roles in regulating jasmonate-responsive gene expression; Tomato Pti4 (ERF) regulates defence-related gene expression via GCC box and non-GCC box cis elements (Myb1 (GTTAGTT) and G-box(CACGTG)); Nuclear events in ethylene signaling: a transcriptional cascade mediated by ETHYLENE-INSENSITIVE3 and ETHYLENE-RESPONSE-FACTOR1;Molecular responses to dehydration and low temperatureUpstream-644
Motif_320AGCBOXNPGLBAGC box repeated twice in a 61 bp enhancer element in tobacco class I beta-1,3-glucanase (GLB) gene;GCC-box; Binding sequence of Arabidopsis AtERFs; AtERF1,2 and 5 functioned as activators of GCC box-dependent transcription; AtERF3 and 4 acted as repressors; AtERF proteins are stress signal-response factors; EREBP2 binding site; Conserved in most PR-protein genes; Rice MAPK (BWMK1) phosphorylates OS EREBP1, which enhance DNA-binding activity of the factor to the GCC boxUpstream-644
Motif_365ARF1 binding site motifARF (auxin response factor) binding site found in the promoters of primary/early auxin response genes of Arabidopsis thaliana; AuxRE;Binding site of Arabidopsis ARF1 (Auxin response factor1); Sequence found in NDE element in Soybean SAUR (Small Auxin-Up RNA) 15A gene promoter;Found in D1 or D4 element in Soybean GH3 promoter; This element was enriched in the 5'-flanking region of genes up-regulated by both IAA and BL;Dimerization and DNA binding of auxin response factorsUpstream-904
Motif_615MARTBOXT-Box; Motif found in SAR (scaffold attachment region; or matrix attachment region, MAR)Upstream-590
Upstream-591
Upstream-592
Upstream-593
Upstream-594
Upstream-941