View conserved binding sites


Gene
GM09G40460
Description
4-hydroxy-tetrahydrodipicolinate synthase
Alias
Glyma09g40460;Glyma09g40460.1;PAC:26342589;Glyma09g40460.1
Binding siteNameDescriptionLocationPosition
Matrix_101ERF5Not availableUpstream-54
Upstream-55
Matrix_110ATABI4;AT3G57600Not availableUpstream-52
Upstream-53
Upstream-55
Upstream-56
Matrix_119RRTF1Not availableUpstream-53
Upstream-54
Matrix_126RBENot availableUpstream-51
Matrix_138RRTF1Not availableUpstream-53
Upstream-54
Matrix_146ORA47Not availableUpstream-54
Upstream-55
Matrix_147ERF3;AT1G80580Not availableUpstream-54
Upstream-55
Matrix_155RAP2.6;ERF110;ABR1Not availableUpstream-55
Matrix_169E2F1Not availableUpstream-55
Matrix_171LBD3;LBD4Not availableUpstream-58
Upstream-59
Matrix_190ATERF1Not availableUpstream-54
Upstream-55
Matrix_224ERF1Not availableUpstream-53
Upstream-54
Matrix_234RAP2.3Not availableUpstream-54
Upstream-55
Upstream-56
Matrix_243RAP2.12;RAP2.2Not availableUpstream-55
Upstream-56
Matrix_252RAP2.6Not availableUpstream-54
Upstream-55
Upstream-56
Matrix_261ATERF-1Not availableUpstream-54
Upstream-55
Matrix_272DEAR4Not availableUpstream-54
Upstream-55
Matrix_287ERF2Not availableUpstream-54
Upstream-55
Matrix_288RAP2.3Not availableUpstream-53
Upstream-54
Matrix_295ERF1Not availableUpstream-54
Upstream-55
Matrix_321HRDNot availableUpstream-54
Upstream-55
Matrix_326AT5G07310;Rap2.6L;AT5G61890Not availableUpstream-53
Upstream-54
Matrix_334AT3G23230Not availableUpstream-55
Upstream-56
Matrix_343AT2G33710Not availableUpstream-54
Upstream-55
Matrix_35YAB5;YAB3Not availableUpstream-58
Matrix_355ERF10;ERF11Not availableUpstream-53
Upstream-54
Matrix_360ORA59Not availableUpstream-54
Upstream-55
Matrix_363RAP2.3Not availableUpstream-53
Upstream-54
Matrix_374AT5G07580;AT5G61590Not availableUpstream-54
Matrix_377AT1G75490;DREB2C;AT2G40350;AT5G18450Not availableUpstream-54
Upstream-55
Matrix_378ATERF1Not availableUpstream-54
Upstream-55
Matrix_385DEAR4Not availableUpstream-53
Matrix_406ATERF-7Not availableUpstream-52
Upstream-53
Matrix_409DEAR3Not availableUpstream-53
Upstream-54
Matrix_426CRF1;CRF2Not availableUpstream-55
Upstream-56
Matrix_45DRNNot availableUpstream-54
Upstream-55
Matrix_454AT1G77200;ATERF38;AT4G16750;AT5G52020Not availableUpstream-53
Upstream-54
Matrix_462ATERF-8Not availableUpstream-52
Upstream-53
Matrix_473RRTF1Not availableUpstream-54
Upstream-55
Upstream-56
Matrix_484ATERF13Not availableUpstream-54
Upstream-55
Matrix_488ABF1Not availableUpstream-47
Matrix_493AT1G22985;AT1G71130Not availableUpstream-54
Upstream-55
Matrix_50ATERF14;AT5G43410Not availableUpstream-53
Upstream-54
Matrix_506DRNL;ATERF-4Not availableUpstream-55
Upstream-56
Matrix_517ERF12Not availableUpstream-54
Upstream-55
Matrix_56BZIP17;BZIP28;BZIP49Not availableUpstream-55
Matrix_57WIN1;SHN3;SHN2Not availableUpstream-53
Upstream-54
Matrix_86CRF5;CRF6;CRF4Not availableUpstream-55
Upstream-56
Matrix_91CRF3Not availableUpstream-54
Upstream-55
Motif_223LTRE1HVBLT49LTRE-1 (low-temperature-responsive element) in barley (H.v.) blt4.9 gene promoter; A new LTRE; A previously known LTRE is CCGACUpstream-328
Motif_279POLASIG3Plant polyA signal; Consensus sequence for plant polyadenylation signalIntron120
Intron117
Intron114
Intron111
Intron108
Motif_313ERF1 BS in AtCHI-BCore of GCC-box found in many pathogen-responsive genes such as PDF1.2, Thi2.1, and PR4; Has been shown to function as ethylene-responsive element; Appears to play important roles in regulating jasmonate-responsive gene expression; Tomato Pti4 (ERF) regulates defence-related gene expression via GCC box and non-GCC box cis elements (Myb1 (GTTAGTT) and G-box(CACGTG)); Nuclear events in ethylene signaling: a transcriptional cascade mediated by ETHYLENE-INSENSITIVE3 and ETHYLENE-RESPONSE-FACTOR1;Molecular responses to dehydration and low temperatureUpstream-55
Motif_318CGCGBOXATCGCG box recognized by AtSR1-6 (Arabidopsis thaliana signal-responsive genes); Multiple CGCG elements are found in promoters of many genes; Ca2+/calmodulin binds to all AtSRsUpstream-59