Matrix_119 | RRTF1 | Not available | Upstream | -183 |
| | | Upstream | -184 |
Matrix_138 | RRTF1 | Not available | Upstream | -183 |
| | | Upstream | -184 |
Matrix_224 | ERF1 | Not available | Upstream | -183 |
| | | Upstream | -184 |
Matrix_234 | RAP2.3 | Not available | Upstream | -182 |
| | | Upstream | -183 |
Matrix_261 | ATERF-1 | Not available | Upstream | -183 |
| | | Upstream | -184 |
Matrix_287 | ERF2 | Not available | Upstream | -182 |
| | | Upstream | -183 |
Matrix_288 | RAP2.3 | Not available | Upstream | -183 |
| | | Upstream | -184 |
Matrix_295 | ERF1 | Not available | Upstream | -184 |
| | | Upstream | -185 |
Matrix_326 | AT5G07310;Rap2.6L;AT5G61890 | Not available | Upstream | -183 |
| | | Upstream | -184 |
Matrix_334 | AT3G23230 | Not available | Upstream | -183 |
| | | Upstream | -184 |
Matrix_343 | AT2G33710 | Not available | Upstream | -182 |
| | | Upstream | -183 |
Matrix_355 | ERF10;ERF11 | Not available | Upstream | -183 |
| | | Upstream | -184 |
Matrix_360 | ORA59 | Not available | Upstream | -184 |
| | | Upstream | -185 |
Matrix_363 | RAP2.3 | Not available | Upstream | -183 |
| | | Upstream | -184 |
Matrix_374 | AT5G07580;AT5G61590 | Not available | Upstream | -183 |
| | | Upstream | -184 |
Matrix_378 | ATERF1 | Not available | Upstream | -182 |
| | | Upstream | -183 |
Matrix_396 | AP3 | Not available | Upstream | -156 |
| | | Upstream | -157 |
Matrix_406 | ATERF-7 | Not available | Upstream | -184 |
| | | Upstream | -185 |
Matrix_426 | CRF1;CRF2 | Not available | Upstream | -183 |
Matrix_473 | RRTF1 | Not available | Upstream | -182 |
| | | Upstream | -183 |
Matrix_484 | ATERF13 | Not available | Upstream | -184 |
| | | Upstream | -185 |
Matrix_493 | AT1G22985;AT1G71130 | Not available | Upstream | -183 |
Matrix_50 | ATERF14;AT5G43410 | Not available | Upstream | -183 |
| | | Upstream | -184 |
Matrix_86 | CRF5;CRF6;CRF4 | Not available | Upstream | -183 |
| | | Upstream | -184 |
Matrix_91 | CRF3 | Not available | Upstream | -183 |
Motif_193 | GLK1 | GLK transcription factors coordinate expression of the photosynthetic apparatus in Arabidopsis | Downstream | 8494 |
Motif_313 | ERF1 BS in AtCHI-B | Core of GCC-box found in many pathogen-responsive genes such as PDF1.2, Thi2.1, and PR4; Has been shown to function as ethylene-responsive element; Appears to play important roles in regulating jasmonate-responsive gene expression; Tomato Pti4 (ERF) regulates defence-related gene expression via GCC box and non-GCC box cis elements (Myb1 (GTTAGTT) and G-box(CACGTG)); Nuclear events in ethylene signaling: a transcriptional cascade mediated by ETHYLENE-INSENSITIVE3 and ETHYLENE-RESPONSE-FACTOR1;Molecular responses to dehydration and low temperature | Upstream | -185 |
Motif_320 | AGCBOXNPGLB | AGC box repeated twice in a 61 bp enhancer element in tobacco class I beta-1,3-glucanase (GLB) gene;GCC-box; Binding sequence of Arabidopsis AtERFs; AtERF1,2 and 5 functioned as activators of GCC box-dependent transcription; AtERF3 and 4 acted as repressors; AtERF proteins are stress signal-response factors; EREBP2 binding site; Conserved in most PR-protein genes; Rice MAPK (BWMK1) phosphorylates OS EREBP1, which enhance DNA-binding activity of the factor to the GCC box | Upstream | -184 |
Motif_358 | UP2ATMSD | Up2 motif found in 193 of the 1184 up-regulated genes after main stem decapitation in Arabidopsis | Upstream | -158 |
Motif_450 | E2FCONSENSUS | E2F consensus sequence of all different E2F-DP-binding motifs that were experimentally verified in plants | Upstream | -1141 |
Motif_453 | HEXMOTIFTAH3H4 | hexamer motif found in promoter of wheat histone genes H3 and H4; CaMV35S; NOS; Binding with HBP-1A and HBP-1B; Binding site of wheat nuclear protein HBP-1 (histone DNA binding protein-1); HBP-1 has a leucine zipper motif; hexamer motif in type 1 element may play important roles in regulation of replication- dependent but not of replication-independent expression of the wheat histone H3 gene;Rice OBF1-homodimer-binding site | Upstream | -609 |
| | | Upstream | -685 |
Motif_50 | AtERF-7;AtERF-4;AtERF-3;AtERF-1;AtERF-2;AtERF-5 | Arabidopsis ethylene-responsive element binding factors act as transcriptional activators or repressors of GCC box-mediated gene expression. Role of an Arabidopsis AP2/EREBP-type transcriptional repressor in abscisic acid and drought stress responses | Upstream | -183 |
Motif_576 | TGACGTVMAMY | TGACGT motif found in the Vigna mungo alpha-Amylase (Amy) gene promoter; Located between -128 and -123; Required for high level expression of alpha-Amylase in the cotyledons of the germinated seeds | Upstream | -609 |
| | | Upstream | -685 |
Motif_69 | CTRMCAMV35S | CT-rich motif (inverted GAGA) found in a 60-nucleotide region (S1) downstream of the transcription start site of the CaMV 35S RNA; Can enhance gene expression; Inverted GAGA | Upstream | -191 |
| | | Upstream | -193 |
| | | Upstream | -195 |
| | | Upstream | -197 |