Matrix_110 | ATABI4;AT3G57600 | Not available | Upstream | -105 |
| | | Upstream | -106 |
Matrix_119 | RRTF1 | Not available | Upstream | -100 |
Matrix_138 | RRTF1 | Not available | Upstream | -100 |
Matrix_154 | AT1G22190;AT1G36060;AT1G64380;RAP2.4;AT2G20880;AT2G22200;AT4G13620;AT4G28140;AT4G39780;AT5G65130 | Not available | Upstream | -90 |
Matrix_179 | AtMYB84;MYB36;MYB68;O49746_ARATH | Not available | Upstream | -92 |
Matrix_190 | ATERF1 | Not available | Upstream | -105 |
| | | Upstream | -107 |
| | | Upstream | -108 |
Matrix_224 | ERF1 | Not available | Upstream | -103 |
| | | Upstream | -104 |
| | | Upstream | -106 |
| | | Upstream | -107 |
Matrix_243 | RAP2.12;RAP2.2 | Not available | Upstream | -111 |
| | | Upstream | -112 |
Matrix_252 | RAP2.6 | Not available | Upstream | -104 |
| | | Upstream | -105 |
| | | Upstream | -107 |
| | | Upstream | -108 |
Matrix_277 | RAP2.6 | Not available | Upstream | -100 |
| | | Upstream | -101 |
| | | Upstream | -109 |
| | | Upstream | -110 |
Matrix_326 | AT5G07310;Rap2.6L;AT5G61890 | Not available | Upstream | -100 |
| | | Upstream | -101 |
Matrix_334 | AT3G23230 | Not available | Upstream | -111 |
Matrix_343 | AT2G33710 | Not available | Upstream | -101 |
| | | Upstream | -102 |
| | | Upstream | -104 |
| | | Upstream | -105 |
| | | Upstream | -107 |
| | | Upstream | -108 |
Matrix_344 | ATERF15;AT4G18450 | Not available | Upstream | -110 |
| | | Upstream | -111 |
Matrix_355 | ERF10;ERF11 | Not available | Upstream | -100 |
Matrix_360 | ORA59 | Not available | Upstream | -110 |
Matrix_363 | RAP2.3 | Not available | Upstream | -100 |
Matrix_377 | AT1G75490;DREB2C;AT2G40350;AT5G18450 | Not available | Upstream | -92 |
| | | Upstream | -93 |
Matrix_378 | ATERF1 | Not available | Upstream | -104 |
| | | Upstream | -105 |
| | | Upstream | -107 |
| | | Upstream | -108 |
Matrix_387 | ORA47 | Not available | Upstream | -90 |
Matrix_395 | AT1G19210;ORA47;AT4G31060;AT5G21960 | Not available | Upstream | -91 |
Matrix_401 | MYB55 | Not available | Upstream | -95 |
Matrix_405 | DREB2C | Not available | Upstream | -108 |
| | | Upstream | -109 |
Matrix_406 | ATERF-7 | Not available | Upstream | -99 |
| | | Upstream | -100 |
| | | Upstream | -108 |
| | | Upstream | -109 |
Matrix_409 | DEAR3 | Not available | Upstream | -91 |
| | | Upstream | -103 |
Matrix_426 | CRF1;CRF2 | Not available | Upstream | -102 |
| | | Upstream | -103 |
Matrix_452 | MYB46 | Not available | Upstream | -95 |
Matrix_462 | ATERF-8 | Not available | Upstream | -99 |
Matrix_473 | RRTF1 | Not available | Upstream | -101 |
| | | Upstream | -104 |
| | | Upstream | -107 |
Matrix_484 | ATERF13 | Not available | Upstream | -110 |
Matrix_493 | AT1G22985;AT1G71130 | Not available | Upstream | -101 |
| | | Upstream | -102 |
Matrix_50 | ATERF14;AT5G43410 | Not available | Upstream | -109 |
Matrix_506 | DRNL;ATERF-4 | Not available | Upstream | -102 |
Matrix_510 | AtMYB84 | More than 80 R2R3-MYB regulatory genes in the genome of Arabidopsis thaliana | Upstream | -92 |
| | | Upstream | -93 |
Matrix_57 | WIN1;SHN3;SHN2 | Not available | Upstream | -100 |
| | | Upstream | -101 |
| | | Upstream | -103 |
| | | Upstream | -104 |
| | | Upstream | -106 |
| | | Upstream | -107 |
Matrix_91 | CRF3 | Not available | Upstream | -101 |
Motif_125 | BOXIINTPATPB | Box II found in the tobacco plastid atpB gene promoter; Conserved in several NCII (nonconsensus type II) promoters of plastid genes; Important for the activity of this NCII promoter | Upstream | -287 |
Motif_305 | SP1SV40 | SP-1 binding site (GC box) in enhancer regions of SV40 and human metallothionein IIA (hMT IIA) | Upstream | -92 |
Motif_309 | GATA promoter motif | Arabidopsis thaliana GATA factors: organisation, expression and DNA-binding characteristics | Upstream | -289 |
Motif_313 | ERF1 BS in AtCHI-B | Core of GCC-box found in many pathogen-responsive genes such as PDF1.2, Thi2.1, and PR4; Has been shown to function as ethylene-responsive element; Appears to play important roles in regulating jasmonate-responsive gene expression; Tomato Pti4 (ERF) regulates defence-related gene expression via GCC box and non-GCC box cis elements (Myb1 (GTTAGTT) and G-box(CACGTG)); Nuclear events in ethylene signaling: a transcriptional cascade mediated by ETHYLENE-INSENSITIVE3 and ETHYLENE-RESPONSE-FACTOR1;Molecular responses to dehydration and low temperature | Upstream | -111 |
Motif_318 | CGCGBOXAT | CGCG box recognized by AtSR1-6 (Arabidopsis thaliana signal-responsive genes); Multiple CGCG elements are found in promoters of many genes; Ca2+/calmodulin binds to all AtSRs | Upstream | -143 |
Motif_375 | ERELEE4 | ERE (ethylene responsive element) of tomato E4 and carnation GST1 genes; GST1 is related to senescence; Found in the 5'-LTR region of TLC1.1 retrotransposon family in Lycopersicon chilense; ERE motifs mediate ethylene-induced activation of the U3 promoter region | Upstream | -254 |