View conserved binding sites


Gene
GM03G40790
Description
No description available
Alias
Glyma03g40790;Glyma03g40790.2;PAC:26335915;Glyma03g40790.2
Binding siteNameDescriptionLocationPosition
Matrix_110ATABI4;AT3G57600Not availableUpstream-105
Upstream-106
Matrix_119RRTF1Not availableUpstream-100
Matrix_138RRTF1Not availableUpstream-100
Matrix_154AT1G22190;AT1G36060;AT1G64380;RAP2.4;AT2G20880;AT2G22200;AT4G13620;AT4G28140;AT4G39780;AT5G65130Not availableUpstream-90
Matrix_179AtMYB84;MYB36;MYB68;O49746_ARATHNot availableUpstream-92
Matrix_190ATERF1Not availableUpstream-105
Upstream-107
Upstream-108
Matrix_224ERF1Not availableUpstream-103
Upstream-104
Upstream-106
Upstream-107
Matrix_243RAP2.12;RAP2.2Not availableUpstream-111
Upstream-112
Matrix_252RAP2.6Not availableUpstream-104
Upstream-105
Upstream-107
Upstream-108
Matrix_277RAP2.6Not availableUpstream-100
Upstream-101
Upstream-109
Upstream-110
Matrix_326AT5G07310;Rap2.6L;AT5G61890Not availableUpstream-100
Upstream-101
Matrix_334AT3G23230Not availableUpstream-111
Matrix_343AT2G33710Not availableUpstream-101
Upstream-102
Upstream-104
Upstream-105
Upstream-107
Upstream-108
Matrix_344ATERF15;AT4G18450Not availableUpstream-110
Upstream-111
Matrix_355ERF10;ERF11Not availableUpstream-100
Matrix_360ORA59Not availableUpstream-110
Matrix_363RAP2.3Not availableUpstream-100
Matrix_377AT1G75490;DREB2C;AT2G40350;AT5G18450Not availableUpstream-92
Upstream-93
Matrix_378ATERF1Not availableUpstream-104
Upstream-105
Upstream-107
Upstream-108
Matrix_387ORA47Not availableUpstream-90
Matrix_395AT1G19210;ORA47;AT4G31060;AT5G21960Not availableUpstream-91
Matrix_401MYB55Not availableUpstream-95
Matrix_405DREB2CNot availableUpstream-108
Upstream-109
Matrix_406ATERF-7Not availableUpstream-99
Upstream-100
Upstream-108
Upstream-109
Matrix_409DEAR3Not availableUpstream-91
Upstream-103
Matrix_426CRF1;CRF2Not availableUpstream-102
Upstream-103
Matrix_452MYB46Not availableUpstream-95
Matrix_462ATERF-8Not availableUpstream-99
Matrix_473RRTF1Not availableUpstream-101
Upstream-104
Upstream-107
Matrix_484ATERF13Not availableUpstream-110
Matrix_493AT1G22985;AT1G71130Not availableUpstream-101
Upstream-102
Matrix_50ATERF14;AT5G43410Not availableUpstream-109
Matrix_506DRNL;ATERF-4Not availableUpstream-102
Matrix_510AtMYB84More than 80 R2R3-MYB regulatory genes in the genome of Arabidopsis thalianaUpstream-92
Upstream-93
Matrix_57WIN1;SHN3;SHN2Not availableUpstream-100
Upstream-101
Upstream-103
Upstream-104
Upstream-106
Upstream-107
Matrix_91CRF3Not availableUpstream-101
Motif_125BOXIINTPATPBBox II found in the tobacco plastid atpB gene promoter; Conserved in several NCII (nonconsensus type II) promoters of plastid genes; Important for the activity of this NCII promoterUpstream-287
Motif_305SP1SV40SP-1 binding site (GC box) in enhancer regions of SV40 and human metallothionein IIA (hMT IIA)Upstream-92
Motif_309GATA promoter motifArabidopsis thaliana GATA factors: organisation, expression and DNA-binding characteristicsUpstream-289
Motif_313ERF1 BS in AtCHI-BCore of GCC-box found in many pathogen-responsive genes such as PDF1.2, Thi2.1, and PR4; Has been shown to function as ethylene-responsive element; Appears to play important roles in regulating jasmonate-responsive gene expression; Tomato Pti4 (ERF) regulates defence-related gene expression via GCC box and non-GCC box cis elements (Myb1 (GTTAGTT) and G-box(CACGTG)); Nuclear events in ethylene signaling: a transcriptional cascade mediated by ETHYLENE-INSENSITIVE3 and ETHYLENE-RESPONSE-FACTOR1;Molecular responses to dehydration and low temperatureUpstream-111
Motif_318CGCGBOXATCGCG box recognized by AtSR1-6 (Arabidopsis thaliana signal-responsive genes); Multiple CGCG elements are found in promoters of many genes; Ca2+/calmodulin binds to all AtSRsUpstream-143
Motif_375ERELEE4ERE (ethylene responsive element) of tomato E4 and carnation GST1 genes; GST1 is related to senescence; Found in the 5'-LTR region of TLC1.1 retrotransposon family in Lycopersicon chilense; ERE motifs mediate ethylene-induced activation of the U3 promoter regionUpstream-254