View conserved binding sites


Gene
GM01G44600
Description
oxophytodienoate reductase-like protein 1
Alias
Glyma01g44600;Glyma01g44600.1;PAC:26324852;Glyma01g44600.1
Binding siteNameDescriptionLocationPosition
Matrix_119RRTF1Not availableUpstream-55
Upstream-56
Matrix_179AtMYB84;MYB36;MYB68;O49746_ARATHNot availableUpstream-32
Upstream-36
Matrix_190ATERF1Not availableUpstream-53
Upstream-54
Matrix_234RAP2.3Not availableUpstream-54
Upstream-55
Matrix_243RAP2.12;RAP2.2Not availableUpstream-52
Upstream-53
Matrix_252RAP2.6Not availableUpstream-54
Upstream-55
Matrix_277RAP2.6Not availableUpstream-52
Upstream-53
Matrix_334AT3G23230Not availableUpstream-52
Upstream-53
Matrix_343AT2G33710Not availableUpstream-54
Upstream-55
Matrix_344ATERF15;AT4G18450Not availableUpstream-53
Upstream-54
Matrix_360ORA59Not availableUpstream-53
Upstream-54
Matrix_378ATERF1Not availableUpstream-54
Upstream-55
Matrix_405DREB2CNot availableUpstream-53
Upstream-54
Matrix_406ATERF-7Not availableUpstream-53
Upstream-54
Matrix_473RRTF1Not availableUpstream-54
Upstream-55
Matrix_484ATERF13Not availableUpstream-53
Upstream-54
Matrix_496ATMYB15Not availableUpstream-36
Matrix_50ATERF14;AT5G43410Not availableUpstream-52
Upstream-53
Matrix_510AtMYB84More than 80 R2R3-MYB regulatory genes in the genome of Arabidopsis thalianaUpstream-32
Upstream-36
Motif_270ELRECOREPCRP1ElRE (Elicitor Responsive Element) core of parsley PR1 genes; consensus sequence of elements W1 and W2 of parsley PR1-1 and PR1-2 promoters; Box W1 and W2 are the binding site of WRKY1 and WRKY2, respectively; ERE; WA box; One of the W boxes found in the Parsley WRKY1 gene promoter; Required for elicitor responsiveness; WC box WB box and WC box constitute a palindrome; WRKY1 protein binding site; W-box found in thioredoxin h5 gene in ArabidopsisUpstream-20
Motif_274MYB1 binding site motifIsolation and characterization of a fourth Arabidopsis thaliana G-box-binding factor, which has similarities to Fos oncoproteinDownstream2610
Motif_292MYBPZMCore of consensus maize P (myb homolog) binding site; 6 bp core; Maize P gene specifies red pigmentation of kernel pericarp, cob, and other floral organs; P binds to A1 gene, but not Bz1 gene; Maize C1 (myb homolog) activates both A1 and Bz1 genesDownstream2608
Motif_309GATA promoter motifArabidopsis thaliana GATA factors: organisation, expression and DNA-binding characteristicsDownstream2664
Motif_313ERF1 BS in AtCHI-BCore of GCC-box found in many pathogen-responsive genes such as PDF1.2, Thi2.1, and PR4; Has been shown to function as ethylene-responsive element; Appears to play important roles in regulating jasmonate-responsive gene expression; Tomato Pti4 (ERF) regulates defence-related gene expression via GCC box and non-GCC box cis elements (Myb1 (GTTAGTT) and G-box(CACGTG)); Nuclear events in ethylene signaling: a transcriptional cascade mediated by ETHYLENE-INSENSITIVE3 and ETHYLENE-RESPONSE-FACTOR1;Molecular responses to dehydration and low temperatureUpstream-54
Motif_348WBBOXPCWRKY1WB box; WRKY proteins bind specifically to the DNA sequence motif (T)(T)TGAC(C/T), which is known as the W box; Found in amylase gene in sweet potato, alpha-Amy2 genes in wheat, barley, and wild oat, PR1 gene in parsley, and a transcription factor gene in ArabidopsisUpstream-19
Upstream-1357
Motif_370TATABOX2TATA box; TATA box found in the 5'upstream region of pea legA gene; sporamin A of sweet potato; TATA box found in beta-phaseolin promoter; sequence and spacing of TATA box elements are critical for accurate initiationUpstream-544
Upstream-563
Upstream-742
Motif_450E2FCONSENSUSE2F consensus sequence of all different E2F-DP-binding motifs that were experimentally verified in plantsUpstream-50