PLAZA 3.0 Dicots DNA motifs

View conserved binding sites

Gene: EG0005G32840
Description: CTP synthase
Alias: Eucgr.E04334;Eucgr.E04334.2;PAC:23580619;Eucgr.E04334.2

Binding site	Name	Description	Location	Position
Motif_129	GAGAGMGSA1	GAGA element found in the promoter of the heme and chlorophyll synthesis gene Gsa1 in soybean; GAGA binding protein (GBP) binds to (GA)n/(CT)n DNA	Intron	1920
			Intron	1922
Motif_183	TRANSINITDICOTS	Context sequence of translational initiation codon in dicots	Upstream	-661
Motif_313	ERF1 BS in AtCHI-B	Core of GCC-box found in many pathogen-responsive genes such as PDF1.2, Thi2.1, and PR4; Has been shown to function as ethylene-responsive element; Appears to play important roles in regulating jasmonate-responsive gene expression; Tomato Pti4 (ERF) regulates defence-related gene expression via GCC box and non-GCC box cis elements (Myb1 (GTTAGTT) and G-box(CACGTG)); Nuclear events in ethylene signaling: a transcriptional cascade mediated by ETHYLENE-INSENSITIVE3 and ETHYLENE-RESPONSE-FACTOR1;Molecular responses to dehydration and low temperature	Upstream	-641
Motif_320	AGCBOXNPGLB	AGC box repeated twice in a 61 bp enhancer element in tobacco class I beta-1,3-glucanase (GLB) gene;GCC-box; Binding sequence of Arabidopsis AtERFs; AtERF1,2 and 5 functioned as activators of GCC box-dependent transcription; AtERF3 and 4 acted as repressors; AtERF proteins are stress signal-response factors; EREBP2 binding site; Conserved in most PR-protein genes; Rice MAPK (BWMK1) phosphorylates OS EREBP1, which enhance DNA-binding activity of the factor to the GCC box	Upstream	-642
Motif_441	GAGA8HVBKN3	GA octodinucleotide repeat found in intron IV of the barley gene Bkn3; Binding site for GAGA-binding factor BBR	Intron	1918
			Intron	1920
			Intron	1922
			Intron	1924
Motif_495	TRANSINITMONOCOTS	Context sequence of translational initiation codon in monocots	Upstream	-661
Motif_69	CTRMCAMV35S	CT-rich motif (inverted GAGA) found in a 60-nucleotide region (S1) downstream of the transcription start site of the CaMV 35S RNA; Can enhance gene expression; Inverted GAGA	Upstream	-935
			Upstream	-933
			Upstream	-931
			Upstream	-929
			Intron	1918
			Intron	1920
			Intron	1922
			Intron	1924
			Intron	1926
			Intron	1928
			Intron	1930
			Intron	1932