View conserved binding sites


Gene
CM00098G00180
Description
Copine family protein 2
Alias
MELO3C026594;MELO3C026594T2
Binding siteNameDescriptionLocationPosition
Matrix_101ERF5Not availableUpstream-340
Matrix_138RRTF1Not availableUpstream-341
Matrix_224ERF1Not availableUpstream-341
Matrix_252RAP2.6Not availableUpstream-340
Matrix_287ERF2Not availableUpstream-340
Matrix_288RAP2.3Not availableUpstream-341
Matrix_295ERF1Not availableUpstream-340
Matrix_334AT3G23230Not availableUpstream-339
Matrix_360ORA59Not availableUpstream-340
Matrix_363RAP2.3Not availableUpstream-341
Matrix_374AT5G07580;AT5G61590Not availableUpstream-340
Matrix_378ATERF1Not availableUpstream-340
Matrix_406ATERF-7Not availableUpstream-342
Matrix_409DEAR3Not availableUpstream-341
Matrix_426CRF1;CRF2Not availableUpstream-339
Matrix_45DRNNot availableUpstream-340
Matrix_473RRTF1Not availableUpstream-340
Matrix_484ATERF13Not availableUpstream-340
Matrix_493AT1G22985;AT1G71130Not availableUpstream-340
Matrix_506DRNL;ATERF-4Not availableUpstream-342
Matrix_57WIN1;SHN3;SHN2Not availableUpstream-341
Matrix_86CRF5;CRF6;CRF4Not availableUpstream-339
Matrix_91CRF3Not availableUpstream-340
Motif_313ERF1 BS in AtCHI-BCore of GCC-box found in many pathogen-responsive genes such as PDF1.2, Thi2.1, and PR4; Has been shown to function as ethylene-responsive element; Appears to play important roles in regulating jasmonate-responsive gene expression; Tomato Pti4 (ERF) regulates defence-related gene expression via GCC box and non-GCC box cis elements (Myb1 (GTTAGTT) and G-box(CACGTG)); Nuclear events in ethylene signaling: a transcriptional cascade mediated by ETHYLENE-INSENSITIVE3 and ETHYLENE-RESPONSE-FACTOR1;Molecular responses to dehydration and low temperatureUpstream-339
Motif_320AGCBOXNPGLBAGC box repeated twice in a 61 bp enhancer element in tobacco class I beta-1,3-glucanase (GLB) gene;GCC-box; Binding sequence of Arabidopsis AtERFs; AtERF1,2 and 5 functioned as activators of GCC box-dependent transcription; AtERF3 and 4 acted as repressors; AtERF proteins are stress signal-response factors; EREBP2 binding site; Conserved in most PR-protein genes; Rice MAPK (BWMK1) phosphorylates OS EREBP1, which enhance DNA-binding activity of the factor to the GCC boxUpstream-339
Motif_643DRE2COREZMRAB17DRE2 core found in maize rab17 gene promoter; DBF1 and DBF2 bound to DRE2; rab17 is expressed during late embryogenesis, and is induced by ABAUpstream-270